Ctenopharyngodon idella (grass carp): 127496785
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Entry
127496785 CDS
T08802
Name
(RefSeq) nucleoporin SEH1-like
KO
K14299
nucleoporin SEH1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127496785
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127496785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127496785
04131 Membrane trafficking [BR:
cide04131
]
127496785
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127496785
Membrane trafficking [BR:
cide04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127496785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
127496785
NCBI-ProteinID:
XP_051720518
LinkDB
All DBs
Position
16:complement(10751095..10761389)
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AA seq
354 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSIKVWDKGDNGEWNCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAIVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISSKLSCSCISWNPSSSRAHAP
MIAVGSDDSNVTYGGKVQIYEYNEVTRKYAKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKDSSSSAPTKFEVQVLAQFDSHNSQVWRVSWNITSTILASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPVYGSSGQPGALSGVLGSAAAQSALNGATGR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcgcgcgcagcattgcagccgatcacaaagatctgattcacgatgtttcatat
gattttcacgggcggagaatggcgacgtgctccagcgaccaaagcattaaggtgtgggac
aagggtgataatggagagtggaactgcacagccagctggaaaactcacagtggctcagtt
tggcgagtgacctgggcccatccagagtttggacaggtgttggcatcctgctcctttgac
cgtactgccatagtatgggaggagattgttggagagtccaatgacaaacaacgagggcaa
agccactggataaagagaaccacacttgtggacagtcggacatctgtgaccgatgtgaag
tttgccccgaagcacatgggcttgatgctgaccacatgttctgcagacggggtagtgcga
atctacgaggcccctgacgtgatgaacctgagccagtggtccctgcagcacgagatctcg
tccaaactctcctgctcctgcatctcgtggaacccttccagttctcgagctcacgctcct
atgattgcagtgggcagtgatgacagcaatgtgacgtatggcggcaaggttcagatatac
gagtataatgaagttacaaggaaatatgccaaagcagagacactgatgacagttacagat
gcggtacatgatattgcatttgctccaaatctgggccggtctttccatgtacttgctatt
gccaccaaagatgttcgcatcttcaaactggttccacttcgaaaggacagctcctcatca
gcgcccactaaatttgaggtgcaggtgctggcccagtttgacagtcataactctcaggtg
tggcgcgtcagctggaacatcaccagtacaattctggcctcctctggtgacgatggctgt
gtgagactctggaaagcaaactacatggacaattggaaatgcacaggtattctaaaggga
gatggcagtccagtatatgggtcatctggtcagcctggtgctctgagtggcgtcctgggc
tctgctgctgcacagagtgctctaaacggggccactggaagatag
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