Canis lupus dingo (dingo): 112669643
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Entry
112669643 CDS
T08371
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud00100
Steroid biosynthesis
clud01100
Metabolic pathways
Module
clud_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112669643 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
clud01006
]
112669643 (FDFT1)
Enzymes [BR:
clud01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
112669643 (FDFT1)
Prenyltransferases [BR:
clud01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112669643 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
112669643
NCBI-ProteinID:
XP_025318683
Ensembl:
ENSCAFG00020011957
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All DBs
Position
25:complement(26078590..26114465)
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AA seq
473 aa
AA seq
DB search
MAAAACGTKAMSLFKRTLVLSPASAPRATGTGSPPRGCPLPPAAWPCKDRARGEGVCGRL
RSPPAAGRLPQSHSCSSAAPSSVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE
MRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLED
FPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS
RLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQREGREFWPQEVWSKYVKKLG
DFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATLAACY
NNQQVFKGIVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQIIS
TIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccgcctgcggcaccaaggccatgtccctgttcaagcggaccctggtgctg
agccccgcctcggcgccccgggccacgggcaccggctccccgccgcgcggctgccccttg
ccccccgccgcctggccctgcaaggaccgggcgcggggagagggcgtgtgcggccgcctg
cggagcccgcccgccgccggccgcctgccccagtcccactcctgctcctccgcggccccc
agctccgtgtgtcttctctgcccgcaggactcgctcagcagcagcttgaaaacctgctac
aagtatctcaatcagaccagtcgcagttttgcagctgtcatcgaggcgctggatggggaa
atgcgccatgcggtatgcatattttatctggtcctccgagctctggacactctggaagat
gacatgaccatcagtgtagaaaaaaaggttccactgctacacaactttcactcttacctt
tatgaaccagactggcggtatatggagagcaaggagaaggatcgacaagtgctagaggac
ttcccaacgatctccctggagtttagaaatttggctgagaaatatcaaacagtgattgtt
gacatttgccggaaaatgggatttgggatggcggagtttttggataaacacgtaacatct
gaacaggagtgggacaagtactgtcactatgtcgctggactggtggggattggcctttcc
cgactgttctcagcctcagagttagaagaccctttagttggtgaagacatagagtgtgcc
aattctatgggcctgtttctgcagaaaacaaacatcatccgtgattatctggaagaccag
cgagaaggaagagaattttggcctcaagaggtttggagcaagtatgttaagaagttgggt
gattttgctaagccacagaatattgactcagccgtgcagtgcctgaacgaacttataacc
aacgcgctacaccacatcccacatgtcatcacttacctctcaagacttagaaaccaaagt
gtgtttaacttctgcgctattccacaggtgatggccattgccactctggctgcctgttac
aataatcagcaggtgttcaaaggtatagtgaagatccgaaaagggcaagcagtaactcta
atgatggatgctaccaatatgccagcggtcaaagctataatataccaatatatggaagag
atttatcatagaatccccagctcagacccatcttctggtaaaacaaggcagatcatctct
accatcaggacacagaatcttcccaattgccagctgatctcccgaagtcactactcccct
atttacctgtcgtttgtcatgctcttggccgccttgagctggcaatatctgagcaccctg
tcccaggtcacagaggactatgttcagactggagaacactga
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