Crocodylus porosus (Australian saltwater crocodile): 109311510
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Entry
109311510 CDS
T07440
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo00100
Steroid biosynthesis
cpoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109311510 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cpoo01006
]
109311510 (FDFT1)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109311510 (FDFT1)
Prenyltransferases [BR:
cpoo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109311510 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
DUF2951
Motif
Other DBs
NCBI-GeneID:
109311510
NCBI-ProteinID:
XP_019392729
Ensembl:
ENSCPRG00005002289
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MTISLETKVPMLHEFHSYLYQPEWRYTESKEKDKQVLEDFPTISLEFRNLAEVYQDVITD
ICRKMGVGMAEYLEKKVNSVQDLDKYCHYVAGLVGIGLSRLFSASELEDPIVGQDTELAN
SMGLFLQKTNIIRDYLQDQLEGREFWPREVWSRYAKKLSDFAKPENADVAVQCLNELITN
ALHHVPDVLKYLSRLKNQSVFNFCAIPQAMAIATLAACYNNKQVFRGVVKIRKGQAVTVM
MDATNVQAVKAIIYQYVEEIYQKIPSTDPSSNKTQQIIATVRTMSLPSSTIVSRNHYSPI
YLSCAMLLAALSWQYLSAMSKASEEYIQAGEN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagtttagaaactaaagtcccaatgctgcacgagttccactcctacctgtat
cagccagagtggaggtacaccgaaagcaaggagaaggacaagcaagtactggaggacttc
cccacaatctccttggagttcaggaacctggctgaggtgtatcaggatgtgatcactgat
atttgtcgtaagatgggagtgggaatggcagagtacctggaaaagaaggtcaactccgtg
caggatttggacaagtattgccactatgttgctggactagtagggattggtctttcccgt
ctcttctctgcttcggagcttgaagaccctatcgtaggacaggacacagagcttgcaaat
tccatggggcttttcctgcagaaaaccaacatcattcgtgattatttgcaggaccagctg
gagggaagggaattctggcccagagaggtttggagcagatatgccaagaagctctcggat
tttgccaaaccagagaatgctgacgtagccgtccagtgtctgaacgagctgattacaaat
gctctccaccatgtccccgatgtcctcaagtacttgtccagactcaaaaaccaaagtgtc
ttcaacttctgtgctattccacaggcaatggccattgccacgctggctgcttgttacaac
aacaagcaagtgtttaggggtgtcgtgaagattcggaagggacaagctgttactgtgatg
atggatgccacgaatgtgcaggccgtcaaagctataatataccagtatgtggaagagatc
taccagaaaatcccaagcacagacccttcttctaacaagacccagcagatcattgccact
gtccggacaatgagtttgcccagcagcaccattgtgtcccgtaaccattattcccccatc
tacctatcctgcgccatgcttttggcagcactgagctggcagtaccttagtgcgatgtcg
aaggcatcagaggagtacattcaggccggcgagaactga
DBGET
integrated database retrieval system
