Carlito syrichta (Philippine tarsier): 103275040
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Entry
103275040 CDS
T07836
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr00100
Steroid biosynthesis
csyr01100
Metabolic pathways
Module
csyr_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
103275040 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csyr01006
]
103275040 (FDFT1)
Enzymes [BR:
csyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
103275040 (FDFT1)
Prenyltransferases [BR:
csyr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
103275040 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
103275040
NCBI-ProteinID:
XP_008070644
Ensembl:
ENSTSYG00000026691
UniProt:
A0A1U7UEF4
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MRHAVCIFYLVLRALDTLEDDMTISVEKKIPLLHNFHSFLYQPDWRFLESKEKDRQVLED
FPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS
RLFSASEFEDPLVGEDVECANSMGLFLQKTNIIRDFLEDQREGREFWPQEVWSKYVKKLG
DFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLTACY
NNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSSKTREIIS
TIRTQNLPACQLISRSHYSPVYLSFVMLLAALSWQYLSTLSQVAEDYVQTGEH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatgcagtgtgcatattttatttggttctccgagctctggacactctggaagat
gacatgaccatcagtgtggagaaaaagatcccactgttacacaactttcactctttcctt
taccaaccagactggcggttcttggagagcaaggagaaggatcgacaagtgctggaagac
ttcccaacgatctcccttgagtttagaaatctggctgagaaatatcaaacggtgattgct
gacatttgccaaagaatgggaattgggatggcagaatttttggataaacatgtgacctct
gaacaggagtgggacaagtactgccactatgttgctgggctggtgggaattggcctgtcc
cgtctcttctcggcctctgagtttgaagaccccttagttggtgaagatgtagagtgtgcc
aactctatgggcctgtttctgcagaaaacaaacatcatccgtgattttctggaagaccag
cgagaaggaagagagttttggcctcaagaggtttggagcaagtatgtgaagaagctgggg
gattttgccaagccagagaacatcgacttggccgtgcagtgcctgaacgaactgataacc
aacgcgctccaccacatcccagatgtcatcacctacctttcaaggctcaggaaccagagt
gtgtttaacttctgtgccattccccaggtaatggccatcgctactttgaccgcctgttac
aataatcagcaggtatttaaaggagtagtgaagattcggaaaggacaggcagtgacgctg
atgatggatgccaccaatatgccagctgtcaaagctataatctaccagtatatggaagag
atctaccaccggatccccagctcagacccgtcttccagcaagacgcgggagatcatctcc
accatcaggacgcagaacctgcccgcctgccagctcatctcccgaagccactactcgccc
gtctacctgtccttcgtcatgctcctggcggccctgagctggcagtacctgagcacgctc
tcccaggtggcggaagactacgttcagaccggggagcactga
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