Dendrobium catenatum: 110115088
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Entry
110115088 CDS
T05027
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
dct
Dendrobium catenatum
Pathway
dct00100
Steroid biosynthesis
dct00909
Sesquiterpenoid and triterpenoid biosynthesis
dct01100
Metabolic pathways
dct01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110115088
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
110115088
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dct01006
]
110115088
Enzymes [BR:
dct01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110115088
Prenyltransferases [BR:
dct01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110115088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
110115088
NCBI-ProteinID:
XP_020703908
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MGMMKDSGRLGIVKAVLEHPEDLMPLMKMKVEANKIKRQIPAESHWGFAYSMLQKVSRSF
FLVIKQLKPELRNAVCIFYLVLRALDTIEDDMRIPIDTKVPILLGFHEHLNDRDWHFSCG
MNAYKVLMDKFHFVSDAFTELHKSYQEAIKNITMRMGAGMAKFICKEVDTIDDYDEYCHY
VAGLVGLGLSKLFYASKLENAVPNSFANSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQ
IWSNYVDNLEDLKYEENAVKAVQCLNDMVTNALVHVEDCLKYMSALKDRSIFGFCALPQV
MAIGTLALCYNNVEVFRGVVKIRHGLAARMSDQTKSMADVYGAFYDFSTLLESKVDKKDP
NASLTLKRVNAIKKACMSSGLLNKRGFYVDERQQLYNSALIMLIALLLAVFFAARMVK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggggatgatgaaggatagtgggagactggggatagtgaaggcggttctggagcatccg
gaggatttgatgcctcttatgaagatgaaggtggaggcgaacaagataaaacggcagatt
ccggcggagtctcactggggattcgcgtactcgatgctgcaaaaggtctctcgtagcttc
ttccttgtaatcaagcagctcaaacccgagctccggaatgctgtttgcatcttctatttg
gttcttagagcccttgatactattgaggatgatatgagaattcctattgacactaaggtg
ccaattttgttaggatttcatgagcatttaaatgaccgtgattggcatttctcatgtggc
atgaatgcttacaaagtcctgatggataagttccactttgtttcagatgccttcacagag
ctgcacaaaagctaccaagaggcaattaaaaatattaccatgagaatgggtgcaggaatg
gcgaaatttatatgcaaggaggtggatacaattgatgactatgatgaatattgccattat
gtagcaggtctagttggattgggactatctaaacttttttatgcttctaaattagaaaat
gcagttcccaattcatttgcaaattcaatgggcttgtttctccagaaaacaaatataata
agggattacttggaagatataaatgagatacccaagtctcgcatgttttggcctagacaa
atttggagtaattatgttgacaacctagaggacttgaaatatgaggagaacgctgtaaaa
gcagtgcaatgcttgaatgacatggtgaccaatgctttggttcatgttgaagattgcctc
aagtatatgtcagcattgaaggaccgatctatctttggattttgtgccttacctcaggtc
atggcgattggaactttagcactatgctataacaatgtggaagtgtttagaggtgttgtg
aaaatccgacatggacttgctgccagaatgagtgatcagacaaaatcgatggcagatgtt
tatggtgctttttatgacttctctactctgctcgagtccaaggttgataagaaagatcct
aatgctagtctcactctcaagcgtgtaaatgcaataaagaaagcatgcatgtcctccggt
ttattaaacaagagggggttttatgtggatgagaggcagcagctgtacaattctgcattg
ataatgcttattgccctcctacttgctgtcttttttgctgcacgtatggtgaaatga
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