KEGG   Dickeya dianthicola: DDI_4016
Entry
DDI_4016          CDS       T05141                                 
Name
(GenBank) Transcriptional repressor of PutA and PutP Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ddq  Dickeya dianthicola
Pathway
ddq00250  Alanine, aspartate and glutamate metabolism
ddq00330  Arginine and proline metabolism
ddq01100  Metabolic pathways
ddq01110  Biosynthesis of secondary metabolites
Module
ddq_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    DDI_4016
   00330 Arginine and proline metabolism
    DDI_4016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ddq03000]
    DDI_4016
Enzymes [BR:ddq01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     DDI_4016
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     DDI_4016
Transcription factors [BR:ddq03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    DDI_4016
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1 DUF7008
Other DBs
NCBI-ProteinID: ATO35184
LinkDB
Position
complement(4137405..4141382)
AA seq 1325 aa
MGTTTMGVKLDEATRERLKAVAQRIDRTPHWLIKQAIFSYLERLESGADTPEIPHPVGQD
LIEAAEIMPQLPQEETHQPFLNFAEQVLPQSVLRSAITAAYRRPETEMVPMLLEQARMPG
AVSHAASALAAGLAEKLRRQKNSGGRAGMVQSLLQEFSLSSQEGVALMCLAEALLRIPDK
PTRDALIRDKISTGNWQSHVGRSASLFVNAAAWGLLVTGKLVSTHNESHLSGALNRIISK
SGEPLVRKGVDMAMRLMGEQFVAGETIAEALANARKREERGFRYSYDMLGEAALTGDDAE
AYLTAYQQAIHAIGKAAGGRGIYEGPGISIKLSALHPRYSRAQYERVMDELYPRLLALTL
LARQYDIGINIDAEEADRLELSLDLLERLCFEPRLAGWNGIGFVIQAYQKRCPFVIDALV
DLARRSQRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKLYTDVSYLACARRLLAAPN
LIYPQFATHNAHTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEQVVGKAADGKLNRPCR
IYAPVGTHETLLAYLVRRLLENGANTSFVNRIADPSVALEALVADPVSETEALAARDGLV
GQPHPRIPLPRALYGGTRRNAGGLDLSSEHRLASLSSALLTSAARSWQAQPMLAVEGDSG
GDSRPVINPAEQRDVVGYVREAQPQDIAQALEQAASAGDIWFATPAAERAAILSRAADLL
ESRQQHLLGLLVREAGKTLANAVAEVREAVDFLRYYAAQVSETFNNHDYRPLGPVVCISP
WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVQILHEAGVPVGVLQLLPGAGET
VGAALVRDERVRGVMFTGSTVVAAQLQRMLAGRLDPQGRTTPLIAETGGINAMIVDSSAL
TEQVVADVVTSAFDSAGQRCSALRLLCVQEEVAEKTLAMLRGAIAECRMGNPERLSTDIG
PLIDAEAKQRIARHIQTLRTKGRPVFQAAWPNSQDQQEWARGHFIPPTLIELESVGDLQQ
EVFGPVLHVVRYSRNQLDALIGHINAAGYGLTLGLHTRIDETINRVTSQATVGNLYVNRN
MVGAVVGVQPFGGEGLSGTGPKAGGPLYLHRLLSHRPQDAAIRTLARQDRERPADVAARQ
PLLAGLQALASWARQVQRDVLVSCCQRYGELTQSGTVRVLPGPTGERDTYTLLPREQVLC
VADNDDDALVQLAAVLAVGSRALWVEAPERQALYRQLPEAVQTRVAFCRDGVTDDSRFDA
VIFHGDADRLRHLSEQLAQRDGAIVGVQGLSRGETDIVLERLLIERSLSINTAAAGGNAS
LMTIG
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgggcaccactactatgggcgttaagctcgatgaggccacgcgcgagcgtctcaaagcc
gtggcgcagcgcattgaccgcacgccgcactggctgattaaacaggccattttcagctat
ctcgaacgccttgaaagtggtgcggacacgcctgaaattcctcatccggtcgggcaggac
ctgattgaggcggcagagattatgccgcaattgccacaagaagaaacccatcaaccgttt
ctgaacttcgctgaacaggtgttgccgcagtcggtgctgcgctcggctattaccgccgcg
taccggcggccggaaacggaaatggtgccgatgctgctggagcaggcacgtatgccgggc
gctgtgtcgcacgcggccagcgcgctggcggcagggttggctgagaaattacgcaggcag
aaaaacagcggcgggcgtgccggcatggtgcagagcctgttgcaggaattctcgctgtcg
tcgcaagaaggagtggcgctgatgtgtctggcggaagcgctgctgcgtatcccggacaaa
cccacgcgggatgcgttgatccgcgacaaaatcagtaccggcaactggcagtcgcacgtc
gggcgcagcgcctcgttgttcgtcaacgccgccgcctggggattgctggtcaccggtaag
ctggtttccactcacaacgaatcccatctttccggcgcgctcaaccgtattatcagcaaa
agcggcgagccgctggtgcgtaaaggcgtggacatggcgatgcggctgatgggcgagcag
ttcgtggccggggaaaccatcgccgaggcgctggcgaatgcccgtaagcgggaagagcgt
ggtttccgttattcctacgatatgctgggcgaggcggcgctgaccggcgatgacgccgag
gcctatttaaccgcctaccagcaggcgattcacgccatcggtaaagccgctggcggacgc
ggtatttacgaagggccgggtatttccatcaaactgtcggcgttgcatccgcgttacagc
cgggcacagtacgagcgggtgatggacgagctttatccgcgcctgctggcgctgacgctg
ctggcgcggcaatacgatatcggcatcaacatcgatgccgaagaggccgaccggctggag
ctgtcgctcgatttactggaacgcctgtgttttgaaccccgactggcggggtggaacggc
atcggctttgtgattcaggcttaccagaaacgctgtccgttcgtgattgacgcgctggtc
gatctggcgcgccgcagccaacggcggctgatgattcggctggtgaaaggcgcctactgg
gacagtgaaatcaagcgcgcccagatggacgggctggaaggctatccggtgtacacccgc
aagctgtacaccgatgtttcctatctggcctgcgcccgccgcctgctggcggcgccgaac
ctgatttacccgcagttcgccacccacaacgcccatacgctcagcgctatctaccatctg
gcgggcaacaactactatccggggcagtatgaattccagtgcctgcacggcatgggcgag
cccttgtatgagcaggtggtgggtaaggcggcggacggcaaactgaaccgcccgtgccgg
atttacgcaccggtcggcacccatgaaacgctgctggcttatctggtgcgccggttgctg
gaaaacggcgccaacacctcgtttgtcaaccggattgccgacccgtcggtggcgctggag
gcgctggtggccgacccggtaagcgaaacggaagcgctggcggcgcgtgacgggctggtc
gggcaaccgcatccgcgtattccgttgccgcgagcgctctatggcggcacgcggcgcaat
gccggcgggttggatttgtccagcgagcaccggctggcgtcgctgtccagcgcattactg
accagcgccgcccggtcgtggcaggcgcaaccgatgctggccgttgagggcgatagcggt
ggcgacagccggccggtgattaacccggcggagcagcgcgatgtggtggggtatgtgcgc
gaggcgcaaccgcaagacatcgcgcaggcattggaacaggctgccagcgccggcgatatc
tggtttgccaccccggctgccgaacgggcggcgattctgtcgcgcgccgccgacttgctg
gaaagccggcaacagcatttgttggggttgctggtgcgcgaggcaggtaaaacgctggcg
aacgcggtggcggaagtgcgtgaagcggtggatttcctgcgttactacgccgctcaggtc
agcgagacgttcaacaatcatgactatcgcccgctagggccggtggtgtgtatcagcccg
tggaactttccactggcgattttcaccggccagatagcggcggcgctggcggcgggtaac
agtgtgctggccaaaccggcggaacagaccccgctgattgccgcgcaggcggtacagata
ctgcacgaggccggggtgccggtcggtgtgctgcaattgctgccgggcgccggcgaaacc
gtcggcgcagcactggtgcgcgacgagcgggttcgaggggtgatgtttaccggctccacc
gttgttgccgcgcagttgcagcggatgctggccggacggctcgacccgcaggggcgcacc
acgccgctcatcgccgaaaccggcggcatcaacgcgatgattgtcgattcctccgcgttg
accgagcaggtggtggcggatgtcgtgacctcggcgttcgacagcgccggccagcgttgt
tcggcgttgcggctgttgtgcgtgcaagaggaagtggcggaaaaaaccttggcgatgctg
cgtggggcgatagcggagtgccgcatgggcaatccggagcggctttccaccgacatcgga
ccgttgatcgacgccgaggcgaaacagcggattgcgcgccatattcaaaccctgagaacg
aaagggcggccggtgtttcaggcggcgtggccgaacagtcaggaccagcaagagtgggcg
cgcgggcatttcatcccgccgacgttgattgaactggagagcgtgggcgatttgcaacag
gaggtgttcggaccggtgctgcatgtggtgcgttactcccgtaatcagctggatgcgctt
atcgggcacatcaacgccgccggttacgggctcacgctcggcctgcatacccggattgac
gagacgattaaccgggtaaccagccaggcgacggtgggcaacctgtatgtgaaccgcaat
atggtcggggcggtggtcggcgtgcagccgttcggcggcgaagggttgtccggtaccgga
cctaaagcgggcgggccgctctatcttcaccgtttgttatcgcaccgtccgcaggacgcg
gcgatacggacgctggcccgtcaggaccgcgagcgtccggcggatgtcgccgcacgccag
ccgctgctggccggattgcaagcgctggcgtcgtgggcacggcaggttcagcgtgacgtg
ctggtttcatgctgccagcgttatggcgaactgacgcagagcggcaccgtgcgggtgttg
cccggccccaccggcgagcgcgatacctatacgctgctgccgcgcgagcaggtgctgtgc
gtggcggataatgacgatgacgcgctggtgcaactggcggcggtgctggcggtgggcagc
cgggcgttgtgggtcgaggcgcccgaacggcaggcgctgtatcggcaactgcccgaggcg
gtgcaaacgcgggtggcgttttgtcgtgacggggtgaccgacgacagccggtttgacgcg
gtgatttttcatggcgacgccgatcggttgcgccacctgagcgaacaactggcgcagcgc
gacggcgcgattgtcggcgtgcaggggttgtcccgcggcgaaaccgacattgtgctggaa
cggctgctgatcgagcgctcgctgagcatcaacaccgcagcggccggcggcaacgccagc
ctgatgacgataggataa

DBGET integrated database retrieval system