Escherichia coli O81 ED1a (commensal): ECED1_1886
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Entry
ECED1_1886 CDS
T00827
Symbol
ydiJ
Name
(GenBank) putative conserved FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq00310
Lysine degradation
ecq01100
Metabolic pathways
ecq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
ECED1_1886 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
CAR08079
UniProt:
B7MVG3
LinkDB
All DBs
Position
complement(1843124..1846180)
Genome browser
AA seq
1018 aa
AA seq
DB search
MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS
TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV
RAVLLGGDILDTQPLPVELVETLGKSNTTIGRIYNTVYQCCRQQRQLIIDNFPKLNRFLT
GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALR
NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDEAL
IDERVNALCVRLDELIASQQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP
FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ
ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKIC
PPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT
QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA
PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEAL
NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF
AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL
ESQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHE
AKNHKNSLGIYELSWHQAMQRLPRNRCLVTGYSCRSQVKRVEGTGVRHPVQALLEIIK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgattccacagatttcccaggcacccggcgtcgttcaactggtgcttaattttttgcaa
gagctggagcaacagggttttaccggcgatacggcgacaagttatgccgatcgtctgaca
atgtcgactgacaacagtatttaccaacttctccccgatgcggtggtatttccgcgttca
accgcagatgtagcgctgatcgcccgtcttgccgcgcaggaacgctattcatcgttgatc
tttacccctcgcggcggcggcaccggcactaacggtcaggcgctcaaccaggggattatt
gttgatatgtcccgccatatgaaccgcatcatcgaaataaaccctgaagagggctgggtg
cgcgttgaggccggggtgattaaagaccaactcaatcagtacctgaaaccctttggctac
ttttttgcgccagaactttcgaccagtaaccgggcaacgctcggcgggatgatcaatacc
gatgcatccggtcagggatcgctggtctatggcaaaacgtcagatcacgtacttggcgta
cgcgcggtgttgttggggggcgatattctcgatacgcaacctttacccgtcgaactggtg
gaaacgctgggtaaatccaataccacaatcgggcgaatttataacacggtttatcaatgt
tgccgtcagcaacgtcagttaatcatcgacaacttccccaagcttaaccgctttcttacc
ggttacgatctgcgtcatgtctttaacgatgagatgaccgagttcgacctgacgcgcatt
ctgacgggttcagaagggacgctggcctttattaccgaagcgcgactggatattacgcgc
ttgcctaaagtacgccgtctggtgaacgtcaaatatgactcttttgactccgcgctgcgt
aacgcgccgtttatggttgaggcgcgggcgctttcggtagagacggtggactcaaaagtg
ctgaatctggcgcgggaagatattgtctggcattccgtcagcgagttgattaccgatgtg
cctgataaagagatgctcgggctgaacattgtggaatttgccggtgatgatgaggcactg
attgacgagcgagttaatgcactctgtgtgcggcttgatgagctgattgccagccaacag
gcaggagtgatcggctggcaggtgtgccgcgagctggcgggtgttgaacgtatctatgcg
atgcgcaaaaaagccgttggtctgcttggcaatgccaaaggtgctgctaagccaattccg
tttgctgaggatacctgcgtaccgccggaacacctggcggattatattgctgaatttcgc
gcgctgctcgacagccacggcttaagctacggtatgttcggtcacgtcgacgcaggtgtc
ttgcacgtccgtccggcactggatatgtgcgatccgcaacaagagattttgatgaagcaa
atctctgatgatgtagtggcgcttaccgcgaaatacggtggtttgttgtggggcgaacac
ggcaaaggttttcgcgccgaatacagcccggcgtttttcggtgaggaactttttgcagaa
ctgcgtaaagtgaaagcggcatttgacccgcataaccgactcaaccccgggaagatttgc
ccgccagaaggtctcgatgcgccgatgatgaaagtggacgcggtgaagcgcggtacattc
gatcgacagatccccattgcggtacgccagcagtggcgtggtgcaatggagtgtaacggc
aacggtttatgcttcaactttgatgctcgtagtccgatgtgtccgtcgatgaagatcacc
cagaaccggattcattcaccgaaagggcgcgcaacgctggtacgtgaatggctgcgtttg
ttggcggatcgcggcgttgacccactcaaactggaacaagaactgcctgaatccggcgtc
agtttgcggacgttaattgcccgcacgcgcaatagttggcatgcgaataaaggcgaatat
gacttctcacacgaagtcaaagaggcgatgtcgggctgtctggcctgtaaagcttgttcg
actcagtgccccatcaaaattgatgtgccggagtttcgctctcgtttcctgcaactctat
cacacccgttatttacgcccgctgcgcgaccacctcgtcgctacggttgagagttacgca
ccgctgatggcacgcgcgccgaaaacctttaacttcttcattaaccagccgctggtgcgc
aaactctcggaaaaacatatcggcatggttgatttgccgctgctgtcggtcccctcgcta
caacaacaaatggtggggcatcgctcggcaaacatgacgctggaacagcttgaagctctc
aatgcagagcagaaagcgcgcacggtgctggtggtgcaggacccctttaccagctattac
gatgctcaagtggtggcggattttgtccgtctggtcgaaaaattaggtttccagcccgtg
ttactgccattttcgccaaatggaaaagcccagcatatcaaaggttttcttaatcgtttt
gcgaagacggcgaaaaagacggcggatttcctcaaccgtatggcgaagctgggtatgcca
atggtaggcgtcgacccggcgctggtactttgttatcgcgatgaatataaactggcgctg
ggcgaggagcgtggcgagtttaacgtcttactggcaaatgaatggctggcaagcgcactt
gagtcacagccagtggctacagtcagcggtgaatcatggtatttctttggtcactgtacc
gaagttaccgccttgccgggcgcgccagcacaatgggcggcaatatttgcccgttttggc
gcgaaactggaaaatgtcagcgtggggtgctgcggcatggcagggacttacggacatgaa
gcgaaaaaccataaaaattcgctcgggatctatgaattatcctggcatcaggcgatgcag
cgactgccgcgtaaccgctgtctggtgaccggatattcctgccgtagtcaggtaaaacgg
gttgaaggcacaggggtacgccatcctgtgcaggctttactggagattattaaatga
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