Eucalyptus grandis (rose gum): 104453372
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Entry
104453372 CDS
T03547
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00100
Steroid biosynthesis
egr00909
Sesquiterpenoid and triterpenoid biosynthesis
egr01100
Metabolic pathways
egr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104453372
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104453372
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
egr01006
]
104453372
Enzymes [BR:
egr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104453372
Prenyltransferases [BR:
egr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104453372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
ODV-E18
Motif
Other DBs
NCBI-GeneID:
104453372
NCBI-ProteinID:
XP_010066209
UniProt:
A0A059BD58
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Position
7:35711455..35719335
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AA seq
413 aa
AA seq
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MGSLGAILKHPDDFYPLLKLKIAARNAEKRIPPQPHWGFCYSMLHKVSRSFGLVIQQLGP
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILKAFHQHVYDKEWHFSCGTKEYKVLMD
QFHHVSTAFLELGKSYQEAIDDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGIGL
SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSEKAVQCLNDMVTNALTHVEDCLTYLSALSDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFYDFSCMLKSKVDKNDPNATKTLSRI
EASQKACRNSGLLNKRKSYIIASKSRYSSILVVVLLIILAIILAQLSASRSSN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagccatcctgaagcacccggacgatttctacccgctgctgaagctg
aagatcgcggcaaggaatgcagagaagcggatccctccgcagccgcactggggattctgc
tactccatgctccacaaggtctcccggagcttcggcctcgttatccagcagctcggcccc
gagcttcgcgacgcggtgtgcatattttatttggtcctgcgagcacttgatacagttgag
gatgacacaagcatacctactgatgtcaaagtgcctatcctgaaagcttttcatcagcat
gtgtatgataaggagtggcatttttcatgtggtacaaaagagtacaaggttctaatggac
caatttcatcatgtttcaactgctttcctggagctggggaaaagttaccaagaggcaatt
gatgatattactaaaagaatgggagcaggaatggcaaaatttatatgccaagaggtggaa
acagttgatgattatgatgaatattgccactatgtggcaggactcgttggtataggtctg
tcaaagcttttccatgcttcaggaactgaagatctggcatcagattctctatccaattca
atgggtttgtttcttcagaaaacaaatattattcgagattatttggaggatatcaatgag
attccaaagtcacgcatgttttggcctcgtcagatttggagtaaatatgtaaacaaactc
gaggacttgaagtatgaggagaactcagagaaggcagtgcaatgtttgaatgacatggtc
accaatgccttaacacatgttgaagactgtttgacatacttgtctgccttaagtgatcct
gctatattccggttttgtgctattcctcagataatggcaattggaacattagctttatgc
tacaacaacattgaagttttcagaggtgtagtaaagatgagacgaggtcttactgctaaa
gttattgatcgcacaaaaacaatggctgatgtttatggtgctttctatgatttttcttgt
atgctgaaatccaaggttgacaagaatgatcctaatgctacaaagacattaagcagaatc
gaggcttcccagaaggcttgcagaaattctggcctcctaaacaaaaggaaatcttacatc
attgcaagtaaatccagatacagctccatcctggtggtcgttttgctcattatactggcg
ataattttggctcaactgtctgcaagcagatcaagcaactag
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