Gymnogyps californianus (California condor): 127014314
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Entry
127014314 CDS
T08687
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl00100
Steroid biosynthesis
gcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127014314
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gcl01006
]
127014314
Enzymes [BR:
gcl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
127014314
Prenyltransferases [BR:
gcl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
127014314
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
127014314
NCBI-ProteinID:
XP_050749575
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All DBs
Position
3:complement(124408668..124423444)
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AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRIDPDSLGRGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLHEFHSYLYQPEWKYMESKERDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQVIASIRAMSLPSGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgaggaaatggctgggccaccccgaggacatctacaacctgctgcggttt
aagatgggcggctaccgggccgtcatgccgcggatcgacccggactcgctgggacgcggc
ctccgcacttgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccag
gccctggacggagagctgcggcatgccgtctgcatattctacctagttctccgtgccctg
gacactatagaggatgacatgaccatcagcttagatgtaaaggtcccgatgctgcacgag
tttcactcctatctgtatcaaccagagtggaagtacatggagagcaaggagagggaccgg
caggtgctcgaggacttcccaacgatctctatggagttcaggaacctgtcaaaggtctac
caggatgtgatttcggatatttgccacaaaatgggagtcgggatggcggagttcttggag
aagaaggtggactctcagcatgagtgggataagtattgtcactacgttgctgggttggtg
gggataggactttcccgtctcttctctgcatcagagctagaagatcctatcgtcgggcag
gacacggagctggccaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatac
gcaaagaagctctcggatcttgccaaaccagagaacatcgatatggctgtccagtgtctg
aatgagctcatcaccaacgccctccaccatgtccctgatgtcctcacgtacttatcccgc
ctgaaaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggctattgccacg
ttggctgcctgctataacaacaagcaggtgttcaggggtgtcgtgaagatccggaaggga
caagccgtcactctcatgatggatgccacaaacatacaagctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatcccaagcacggacccgtcatccaacaagacg
cagcaggtcatcgcctccatccgcgccatgagcttgcccagcggccccatggcatcacgc
caccactactcccccatctacctgtcatgcgccatgctcctggccgccctgagctggcag
tacctgagcaccatctccaaagccaccgaggagtacgtccaggcgggcgaaaactga
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