Geospiza fortis (medium ground-finch): 102044004
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Entry
102044004 CDS
T03755
Symbol
SPTLC2
Name
(RefSeq) serine palmitoyltransferase long chain base subunit 2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00600
Sphingolipid metabolism
gfr01100
Metabolic pathways
Module
gfr_M00094
Ceramide biosynthesis
gfr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
102044004 (SPTLC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gfr01007
]
102044004 (SPTLC2)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
102044004 (SPTLC2)
Amino acid related enzymes [BR:
gfr01007
]
Aminotransferase (transaminase)
Class II
102044004 (SPTLC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Rep3_C
Motif
Other DBs
NCBI-GeneID:
102044004
NCBI-ProteinID:
XP_005417509
UniProt:
A0A6I9HCS3
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All DBs
Position
Un
AA seq
495 aa
AA seq
DB search
MLVAVLTYVGYGVLTLFGYLRDFMRQWKIEKCQNATEREEQKDFVPLYQDFENFYNRNLY
MRIRDSWNRPICSVPGAKVDMMERVSHDYNWTFTYTGRVIKDIINMGSYNYLGFAQKTGA
CQEAAAKVLSQYGAGVCSTRQEMGNLDKHEELEKLVARFLGVESAMAYGMGFATNNLFLF
PLLIQGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVHGQPRTRRPW
KKILILVEGIYSMEGSIVRLPEVIALKKKYKSYLYLDEAHSIGALGPSGRGVVDYFGLNP
EDVDVMMGTFTKSFGAAGGYIAGKKELIDYLRTYSHSAAYATSMSPPVVEQIITSVKCIM
GEDGTTIGRARVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREML
KRNIGVVVVGFPATPIIESRARFCLSAAHTKEMLDTALKEINEVGDLLQLKYSRRRLVPL
LDRPFDETTYEETED
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgctgtgctgacctatgttggctatggcgttctcactctctttggatatctg
cgagatttcatgaggcagtggaagattgagaagtgtcaaaatgcaacagaaagagaagaa
cagaaggactttgtcccattgtaccaggactttgaaaatttctacaacagaaacctctat
atgcgcattcgggacagctggaaccgtccgatctgcagtgtgccaggggccaaagtggac
atgatggagagagtttcccatgactataactggacattcacatacacagggagagtgata
aaagacatcataaatatgggttcctacaactaccttgggtttgcacagaagactggggct
tgccaagaagcagctgctaaagttctgtcccagtatggagctggggtgtgcagcacccgg
caggagatgggaaacttggacaagcatgaggagctggaaaagctagttgccagattccta
ggtgtggaatctgcaatggcatatggaatgggatttgcaaccaacaatctattcctcttt
ccccttctaattcagggctgtctgattctgagtgatgaactgaatcatgcatcactagtg
cttggagcaagactgtcaggagcaactattcgaatctttaagcacaacaatatgcaaagc
ctggagaagctgctcaaagatgctattgtgcatgggcaacctcgtacacggaggccctgg
aaaaaaattcttatcttggtggaaggaatatacagtatggagggatccatagtccgtttg
cccgaagtgattgcccttaagaagaagtacaaatcctatctgtaccttgatgaagctcat
agtataggtgccctgggtcccagtggccggggtgtagtggattattttggactcaatcct
gaagatgtggatgttatgatgggaacattcacgaaaagctttggagctgcaggaggatac
attgcgggcaagaaggaactgattgattacctcaggacatactctcacagtgctgcgtat
gcaacatcaatgtcacctcctgttgtggagcaaatcatcacctctgtgaagtgcattatg
ggtgaagatggtacaactattgggagagcacgtgtgcagcagctagcagagaacacgaga
tatttcaggagacgactgaaagagatgggctttatcatctatggaaatgaagattcccct
gttgtgcctctgatgctgtacatgccagcaaaaattggcgcatttggccgtgagatgctg
aagcggaacatcggtgttgtggttgtgggcttccctgccacccccatcatcgagtccaga
gccaggttctgtttgtctgcagctcataccaaagagatgcttgatacagctttaaaagaa
atcaatgaagttggggaccttttgcaactgaaatattcccgtcgccgtttggtacctctc
ttggaccggccgtttgacgagaccacatatgaagaaacagaagactga
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