Glycine soja (wild soybean): 114372247
Help
Entry
114372247 CDS
T06057
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00906
Carotenoid biosynthesis
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
Module
gsj_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
114372247
Enzymes [BR:
gsj01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
114372247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Thi4
HI0933_like
FAD_oxidored
GDI
GIDA
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
114372247
NCBI-ProteinID:
XP_028185522
LinkDB
All DBs
Position
10:11233873..11240809
Genome browser
AA seq
609 aa
AA seq
DB search
MLNSSFLTVSEHTFSHTPHHFPTRASSQSPNLQPQFQSLAFANHVVSEFPSGSCSNAPRR
KGVLAVRSKSTLGVEEVVAEGGGVKGKGEEEFDAIVIGSGIGGLVAGTQLAVKGARVLVL
EKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQVVPDPTTVY
FHLPNNLSVRVHKEYDKFTEELTSYFPHEKEGILKFYGECWKIFDALNSLELKSLEEPLY
LFGQFFQKPLECLTLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINA
AMVLCDRHFGGINYPLGGVGGIAKSLAKGLVDQGSEIAYKANVTSIIIEQGKAVGVRLSN
GREFFAKTIISNATRWDTFGKLLKDIPLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPD
TDCHHFVLESNWSKLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSVEDWEGLSRAD
YEAKKQLVADEITSRLENKLFPGLRSSIDFMEVGTPKTHRRYLARDEGTYGPMPRRIPKG
LLGMPFNTTGIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDSMLLR
LLGWLRTMA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattcctctttcctcaccgtttctgaacacaccttttcccacactccccatcat
ttcccaacaagggcttcttctcaaagccccaaccttcagccacagtttcaatctttagcc
tttgcaaaccatgtagtgagtgaattcccatctgggtcttgctccaatgcccccagaaga
aaaggggtgttggctgtgcggtcaaagtcaacgctgggagtagaagaagtggtggcagag
ggaggaggagtgaagggtaagggtgaagaagagtttgatgcaattgttatagggtctggg
attggagggttggttgcagggacacagttagcagtgaagggtgcaagagttttggttttg
gagaagtatgtgattcctggtggaagctctggtttttaccagagagatgggtatactttt
gatgtggggtcctctgtcatgtttggtttcagtgataagggtaatctcaatttgataaca
caagcgttggaagcagttggttgtcggatgcaagtggtgcctgatccaacaaccgtttac
ttccatctaccaaataacctttctgttcgagtgcacaaagaatatgataaatttactgaa
gaattgaccagttactttccccatgaaaaggagggtattctcaaattctacggtgaatgc
tggaagatttttgatgccctgaattcgttggaattgaagtcactagaagagccactctac
ctttttggacagttttttcagaagccacttgaatgcttgacactagcctattatttgcct
caaaatgctggagccatagctcggaagtacattcaagatccacagttgttgtctttcata
gatgcagagtgttttatagtgagcacagtcaatgctttgcagacaccaatgatcaatgct
gccatggttctatgtgacagacactttggtgggattaactaccctcttgggggtgttggt
gggattgcaaagtccttagcaaaaggtctcgttgatcagggtagtgagatagcttacaaa
gcaaatgtcaccagtattataattgagcagggcaaagctgttggtgtgaggctttcaaat
ggcagagagttctttgccaaaaccataatatcaaatgctaccagatgggatacatttgga
aagttactgaaggacattccacttccgaaagaagaagagaacttccagaaagtttatgtt
aaagctccatcttttctttcaattcacatgggggttaaagcagaggttttaccaccagat
acagactgtcaccatttcgtgcttgagagcaactggtccaaattggaggagccatatgga
agtatctttctaagtataccaactgttcttgattcatcattggctcctgaaggccgtcat
atccttcatatattcacaacttcttctgtggaggactgggagggtctttcaagagcagac
tacgaggcaaagaagcagcttgtagcagatgaaatcacaagcagattagagaataaattg
tttccaggtcttagatcatccattgattttatggaggtagggaccccaaagacacaccgg
cgatacctggctcgtgacgagggaacttatggtccgatgccgcgcagaatcccaaaaggg
ttattgggaatgccattcaataccacaggcatagatggtctttactgtgttggtgatagc
tgcttccctggacaaggtgttattgctgtagctttctcaggagttatgtgtgctcatcga
gtagctgctgatattgggctggagaagaagtcacctgtgttggattccatgctgcttcgg
ttgcttggttggttaagaacaatggcatga
DBGET
integrated database retrieval system