Hevea brasiliensis (rubber tree): 110646492
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Entry
110646492 CDS
T05150
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr00100
Steroid biosynthesis
hbr00909
Sesquiterpenoid and triterpenoid biosynthesis
hbr01100
Metabolic pathways
hbr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110646492
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
110646492
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hbr01006
]
110646492
Enzymes [BR:
hbr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110646492
Prenyltransferases [BR:
hbr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110646492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
110646492
NCBI-ProteinID:
XP_021655633
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MGSLGAILKHPDDFYPLLKLKMAVRHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLGP
QLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDCEWHFSCGTKDYKVLMD
QFHHVSTAFLELGKSYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLAPDVLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQTWSKYVNKL
EDLKDEENSVKAVQCLNDMITNALIHVDDCLTYMSALRDPAIFRFCAIPQVMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDQTKTMADVYGAFFDFSCMLKSKVDRSDPNAEKTFSRV
EAIQKTCRESGLLNKRKSYIIRNKPRYNPALIILLVIILSIIFAYRSGNQASN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttgggagccattttgaaacacccagatgatttttacccgcttttgaagttg
aaaatggccgtgaggcatgcagagaagcagatcccaccagaacctcactggggtttttgt
tactccatgcttcacaaggtctctcgtagctttgctctagtcattcagcagcttggtcct
cagcttcgtaacgctgtatgcatattctatttggttcttcgagcccttgatactgttgag
gatgatacaagcatacctacagatgtgaaggtgcctattctgatagcttttcaccgtcat
atatatgattgcgagtggcatttttcttgtggtactaaggactacaaagttctcatggac
cagtttcatcatgtttcaactgcctttctagagcttgggaaaagttatcaggaggcaatc
gaggatattacaaaaagaatgggtgcaggaatggctaaattcatatgcaaggaggtggaa
acagttgatgactatgatgaatattgccattatgtagctggacttgttggactaggcctg
tccaaacttttccatgcctctggatcagaagatttggcaccagatgtcctctccaactca
atgggtttatttcttcagaaaacaaacattattagagattatttggaggatataaatgag
atccctaagtcacgcatgttttggcctcgtcagacctggagtaaatatgttaacaaactc
gaggacttgaaagatgaagagaactcagtcaaggcagtgcaatgcttgaatgatatgatt
actaatgctttgattcatgtggatgattgcttgacatacatgtctgcattgcgagatcct
gctatatttcgattttgtgccatccctcaggtcatggcaattggaaccctagcactatgc
tacaacaacattgaagtattcagaggtgtagtaaaaatgaggcgtggtcttactgctaaa
gtcatcgaccaaacaaaaactatggctgatgtctatggtgctttctttgacttttcctgt
atgctcaagtccaaggttgacaggagtgatcctaatgcagaaaagacatttagcagggtg
gaagcaatacaaaaaacttgcagggagtctggacttctaaacaaaagaaaatcttatatt
attagaaacaagccaagatataatcctgctctgattatcctacttgttattatattgtcc
atcattttcgcttatcgttctgggaaccaagcaagcaactaa
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integrated database retrieval system