Halorubrum lacusprofundi: Hlac_1206
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Entry
Hlac_1206 CDS
T00856
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hla
Halorubrum lacusprofundi
Pathway
hla00100
Steroid biosynthesis
hla00909
Sesquiterpenoid and triterpenoid biosynthesis
hla01100
Metabolic pathways
hla01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Hlac_1206
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Hlac_1206
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hla01006
]
Hlac_1206
Enzymes [BR:
hla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Hlac_1206
Prenyltransferases [BR:
hla01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Hlac_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACM56800
UniProt:
B9LN62
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All DBs
Position
1:1214957..1216024
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AA seq
355 aa
AA seq
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MSGRAHGPAEPDLSWCHEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGH
IPPEAQSDVLRTYRRAIDPDDDTDIVAFRDAVDEWLPAPADRNDDWEVVAEVPTIVATFA
EFEPEARDAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNL
LTRGDVTEDRARQLRDTAEEFGLLLQLVNVSKDVYDDYTEENNVYLPAEWLADEGVDQER
VVHPENRESSARVVSRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTLREL
SSRPEDALTETGVKISRQEVFAVMAVAGDAGRDSLADLRQTIARTPFHRAVEPAD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgagcacacggtcccgctgagcccgacctctcgtggtgtcacgaggcggtt
cagggcgtttctcggaccttcgcgctgacggtcgacgtgttggaggagccgatggcctcg
catatctgcgtgggatacctcctctgtcgggtcgccgataccgtcgaggacgccggacac
atccctcctgaagctcaaagcgacgtgttgcggacgtaccggcgcgcgatcgaccccgac
gacgacaccgacattgtggcgttccgcgacgcggtcgacgagtggctcccggcgcccgcc
gaccgcaacgacgactgggaagtcgtcgccgaggtaccgacgatcgtggcgacgttcgcg
gagttcgagcccgaggcccgcgacgcgatcgtcccacccgtcttggaaatggttgacggg
atggcgatgttcgtcgatcggcacgccaccgagggcgggctccgtatcgacgaccgcgac
gaactagagcagtactgctactacgctgccggcacggtcgggaacctcatcacgaacctg
ctcacccgtggcgacgtcaccgaggaccgcgcgcggcaactacgagacacagccgaggag
ttcggactcctcctccaactcgtgaacgtctcgaaagacgtgtacgacgactacaccgag
gagaacaacgtctaccttcccgccgagtggctcgccgacgagggggtcgaccaagagcgc
gtcgtccacccggagaatcgggagtcgtccgcccgcgtcgtcagccggaccgccgagtac
gcccggtcgttcctcgacgacgcgcaggcgtacttagagacgatgccgctctcgaacgga
aacacgatggaggcgtggaccgtcccgtacctgctcgcggtcggtaccctccgcgaactc
agttcccgtcccgaggacgcgctcaccgaaaccggcgtgaaaatctcccgccaggaggtg
ttcgcggtgatggccgtcgccggcgacgccggccgcgactccctcgcagatctccggcag
acgatcgcgcggactcccttccaccgggccgtcgagcctgcggactga
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