Halobiforma lacisalsi: CHINAEXTREME19195
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Entry
CHINAEXTREME19195 CDS
T04669
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hlc
Halobiforma lacisalsi
Pathway
hlc00100
Steroid biosynthesis
hlc00909
Sesquiterpenoid and triterpenoid biosynthesis
hlc01100
Metabolic pathways
hlc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CHINAEXTREME19195
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CHINAEXTREME19195
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hlc01006
]
CHINAEXTREME19195
Enzymes [BR:
hlc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CHINAEXTREME19195
Prenyltransferases [BR:
hlc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CHINAEXTREME19195
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GFIT
Motif
Pfam:
SQS_PSY
Arg_decarbox_C
HetR_C
Motif
Other DBs
NCBI-ProteinID:
APW99764
UniProt:
M0LUM1
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All DBs
Position
3939608..3940666
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AA seq
352 aa
AA seq
DB search
MTSGQPEYGIHADLEWCFDAVHGVSRTFSITIDRLEEPMARHICVGYLLCRVADTIEDAG
HIPPETQTELLQEYDRLLDPETDTDRTVATFMEKVEPWLPAPEERDQDWEVVARTPRVLG
TFESLDEEPREIMRDPVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLI
TGLVARGASEERAEEMRDNARSFALLLQLVNIAKDVENDYHEENNVYLPAEWLADEEVPA
EAVTDAENHGAVTNVIRRVTSRAETYVDDAHRYLEVVPEKHGNRLSAWAIPYLLAVGTMR
ELRERPEDVVREGDVKVPRAEVYALIQQFEDDISRSRLEELRQEMAEKPLHH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacctccggccagcccgaatacggaatccacgccgacctggagtggtgtttcgacgcg
gttcacggcgtttcgcggaccttctcgattactatcgatcggctcgaggagccgatggcg
agacacatctgcgtcggctacctcttatgtcgagtcgcagatacgatcgaggacgcgggc
cacatcccgccggagacccagaccgagttgctccaggagtacgatcggctgctcgatccc
gagacagacaccgaccgaacggtcgcgacgttcatggagaaagtcgaaccctggctcccc
gcccccgaggagcgcgaccaggactgggaagtcgtcgctcggacaccacgcgtgctgggg
accttcgagtccctggacgaggagccccgggagatcatgcgcgatccggtccgcgaactc
gtcgacgggatggcgatgtttaccgatcgctacgccgacgagggcggactccgcctgcag
acgctcgaggaactcgaggagtactgctggtacgctgcgggtacggtcgggacgctgatc
acgggcctggtcgctcgcggcgcctccgaagagcgagccgaagagatgcgggacaacgcc
cgctcgttcgccctgctcttgcaactggtcaacatcgccaaggacgtagaaaacgactac
cacgaggagaacaacgtctaccttcccgccgagtggctcgcggacgaggaggtgccggcc
gaggcggtcaccgacgcggagaaccacggcgccgtcacgaacgtcatccgacgggtcacc
agtcgcgccgagacgtacgtcgacgacgctcaccgctacctcgaggtcgtcccggagaaa
cacggcaatcggctgtcggcctgggcgatcccgtacctgctcgcggtcgggacgatgcgg
gaactccgcgaacggccggaagacgtcgtccgcgagggcgacgtgaaggtgccacgcgcg
gaagtctacgcgctgatccagcagttcgaggacgacatctcccgctcccgactcgaggaa
ctccgtcaggagatggcggagaagccgctgcaccactga
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