Labeo rohita (rohu): 127154433
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Entry
127154433 CDS
T09007
Symbol
iqsec1a
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and Sec7 domain ArfGEF 1a
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127154433 (iqsec1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127154433 (iqsec1a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127154433 (iqsec1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
NRBF2
PH_19
RHG20_PH
bZIP_2
SlyX
Motif
Other DBs
NCBI-GeneID:
127154433
NCBI-ProteinID:
XP_050951901
LinkDB
All DBs
Position
23:31536094..31627872
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AA seq
1019 aa
AA seq
DB search
MDSRTENPTKAAGYLKELNKIIETQQTLLERQKRRIFELEQHVSDLCAENSRLRHEYQRH
LLTCRLRSIQENSPQQQPEYGSTRIVRRHASLPVEMTDSPSSLRSAVCMRTVPCRQWKSA
SFGVEGNVQNSEPGPSLDTSIGYGHGRGPVTHSSSLSPDQFESPVYGHSVQPGPQRPQRP
KLQHSQSILRKQAEEEAIKRSRSLSESYELSTDLQDKKVEMLERKYGGRFITRHAARTIQ
TAFRQYQMNKNFERLRSSMSENRMSRRILLSNMRMQFSFEGPEKVHAPLLEGRQMSLLDD
VSQVGGMVQAGEMVPVILEAPEPQNDLTDAITELEDTFSRQVKSLAESIDDALNCRSLHK
DEMQPEQVVCQEGMQQDDELPQPDKHHKLDEICDVTLFIDEEELSPLVQSSCPIEQPSGS
ESEQHMQTVSWSVNAKDDKVDSDTSYRSTPSLECQGPRICADLPLLTIEPPSDSSADVSD
RSEHGSVQPLNIHERTAAAPRAGPKQVTHGLPPRVPSLSRDEEPLRHRQVESHLATNGNR
QSKSESDFSDGDNDSINSNSNSIDTINSELSSRDENLREQSLSKQTYHKDTRNSWDSPAF
SSDIMRKRQYRIGLNLFNKKPEKGIQYLTERSFIPDTPVGVAHFLLQRKGLSRQMIGEFL
GNRQKQFNRDVLDCVVDELDFSGMELDEALRKFQAQIRVQGEAQKVERLIEAFSQRYCIC
NPDVVRQFRNPDTIFILAFAIILLNTDMYSPNVKLERKMKLEDFVKNLRGVDDGEDIPRE
MLVGIYERIQKKELKTNEDHVSQVQKVEKLIVGKKQMGSLHHGLGCVLSQAHRRLVCYCR
LFEVPDPNRLQKLGQHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVMLFEN
QFYPNGIRLTSAIPGADFKVLINFNAPNSQDRKKFTSDLRESIAEVQEMEKYRIESELEK
QKGVVRPSMSQSMSGLKKETGNGTMGRTSLDDTYAMGEGLKRSALSSSLRDLSDAGLHL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggacagccggaccgagaatcccaccaaggcagcgggttatctgaaggagctgaataag
atcatagagacccaacagacgctgctggagaggcagaagaggcgcatctttgagctggag
cagcatgtgtccgacctgtgcgccgaaaacagccgtctgagacacgagtaccagcggcat
ctgctcacctgcagactgcgctccatccaagaaaacagcccgcaacagcaaccagaatat
ggcagtacaagaatcgtcagaagacacgcctctcttcctgtggaaatgacagacagtccc
agcagcctcagatcagccgtgtgtatgagaaccgtgccgtgccgacagtggaagtctgca
tctttcggtgtggaggggaatgttcaaaacagtgagccgggcccttccttggacaccagc
ataggatatggccatggccgtggccctgtcacacacagttcttccttgagtccggaccag
tttgagagcccagtgtacggccacagcgtccaaccaggcccacagcgccctcagcgaccc
aaactacagcactctcaatctatcctccgcaagcaggcagaggaggaggccatcaaacgc
tcacgctccctctctgaaagctatgagctctccacagaccttcaggacaagaaggtggaa
atgcttgagcggaaatatggaggccgtttcataacccgccatgctgcacgcaccatccag
acggctttccgccagtaccaaatgaacaagaactttgagcgtctcaggagctctatgtcg
gagaaccgcatgtcccgcaggattcttttgtccaacatgaggatgcagttttcctttgaa
ggacctgagaaagtccacgcccctcttttggaggggaggcaaatgtctctcctggacgat
gtcagccaagtaggaggcatggtgcaggctggagagatggttcctgtcattttggaagcc
ccagaaccgcaaaacgacttaacagatgcgatcacagagctagaggatactttctcaagg
caagtgaagtcgttggcggagtcgatcgacgacgcgctgaactgccgtagtctgcacaaa
gacgagatgcagcctgagcaagtggtttgtcaagaggggatgcagcaggatgatgagctt
cctcagcctgataagcaccacaagctggatgagatctgtgacgtgacgctctttatcgat
gaagaggagctctctccactggttcagtcgtcctgcccaatagagcagccatctggctct
gagtctgaacagcacatgcagactgtcagctggtctgtgaatgccaaggatgacaaggtg
gactcggacactagctacagaagcactccttctctcgaatgccaggggccgcggatctgt
gcagacttacccctgttgaccatcgagcctcccagcgacagctcagcagatgtaagcgat
cgctctgagcacggttcagtccagccactaaatattcacgaacgcactgcagcggcacca
cgggcaggccccaaacaagtcacacatggactacctcctagagttccctcgctttctcga
gacgaagagccgcttagacaccggcaggtggagagccacctggccaccaacggcaacagg
cagagcaagtcagagtcagacttttcagacggagacaatgacagtattaacagcaattca
aattccattgacaccataaactctgaattgtcatctagagatgagaatctgagagaacag
agtctcagcaaacagacctaccacaaagacactcgcaacagctgggactctccggccttc
agcagtgatatcatgcgcaagagacaataccgcatcggcctcaacctcttcaataaaaag
ccagagaagggaatacagtacctgacggagaggagctttattcctgacacgcccgtgggt
gtggcccacttcctgctgcagaggaaaggcttgagtagacaaatgattggtgaatttctc
gggaacagacagaaacagttcaacagggatgttttagactgtgtggtggatgagctggat
ttctcagggatggagctggatgaagctttgcggaaattccaggctcaaatccgggttcag
ggggaggcacagaaggtggagcgcctgatcgaggctttcagccagcgctactgcatctgt
aaccctgatgtggttcgtcagttcagaaaccctgacaccatcttcatcttggctttcgcc
attatcctcctcaacacagacatgtacagccccaatgtcaagctggaacgcaagatgaaa
cttgaggactttgtcaagaatctacgaggagttgatgatggcgaggacatccctcgggag
atgctggttggtatttacgagcggatccaaaagaaggagctcaaaactaatgaggaccac
gtgtctcaggtgcagaaggtggagaaactcattgtgggcaagaagcaaatgggatcactt
caccatggccttggatgtgtgttgtctcaggcccatcgcaggctggtgtgctactgcaga
ctattcgaggtcccagatcctaacagactgcaaaaactcgggcagcaccagcgggagatc
ttcctatttaatgacctcctggtggttaccaagatcttccagaagaagaaaaattcagtg
acgtatagtttcaggcaatctttctctctgtacgggatgcaagtgatgctctttgagaac
cagttctatcctaacggtatcaggctgacttcagcaattcctggtgcagacttcaaagtc
ctgatcaatttcaatgctcccaactctcaggaccgcaagaaattcaccagtgacctgcga
gaatccatcgctgaggtccaggaaatggaaaagtaccggatagagtctgagctggagaaa
cagaaaggagtggtcagacccagtatgtctcagagcatgtcaggcctgaagaaagagacc
ggaaacggcaccatgggccgcactagtctggatgacacgtacgccatgggggaggggctg
aagcggagtgcgctcagtagctccttacgtgatctttctgatgcagggctccatctttag
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