Labeo rohita (rohu): 127178521
Help
Entry
127178521 CDS
T09007
Name
(RefSeq) nucleoporin SEH1-like
KO
K14299
nucleoporin SEH1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
lroh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127178521
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127178521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127178521
04131 Membrane trafficking [BR:
lroh04131
]
127178521
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127178521
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127178521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
127178521
NCBI-ProteinID:
XP_050987401
LinkDB
All DBs
Position
16:28150024..28155497
Genome browser
AA seq
351 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSIKVWDKGDNGEWNCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAIVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISSKLSCSCISWNPSSSRAHAP
MIAVGSDDSNVTYGGKVQIYEYNEVTRKYAKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKDSSSSAPTKFEVQVLAQFDSHNSQVWRVSWNITSTILASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPVSGQPGALSGILGSAGAQSALNGATGR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcgctcgaagcatcgcagcagatcataaagatctgattcacgatgtttcttat
gatttccacgggcggagaatggcaacgtgctccagcgaccagagcattaaggtgtgggat
aaaggtgataatggagaatggaactgcacagccagctggaaaactcacagtggctcagtt
tggagagtgacctgggcccatccagagtttggacaggtgttggcatcctgctcctttgat
cgtactgcgatagtatgggaggagattgttggagagtccaatgacaaacaacgaggacaa
agccactggataaagaggaccacactcgtggacagccggacatctgtgaccgatgtgaag
tttgcaccaaagcacatgggcttaatgctgacgacatgctctgcagacggggtggtccga
atctacgaggcccctgatgtgatgaacctgagccagtggtcccttcagcatgagatctca
tccaaactctcctgctcctgcatctcctggaacccttcaagttctcgagctcatgctcct
atgattgcagtgggtagcgatgacagcaatgtgacgtatggcggcaaggttcagatatac
gagtataatgaagttacaaggaaatatgccaaagctgagacactgatgacagttacagat
gctgtacatgatattgcatttgctcctaatctgggacggtctttccacgtacttgctatt
gcaaccaaagatgtgcgcatcttcaaactggtccccctccgaaaggacagctcttcttca
gcacccactaaatttgaggtgcaggtcctggcccagtttgacagccataactctcaggtt
tggcgtgtcagttggaacatcaccagtacaattctggcttcctctggcgatgatgggtgt
gtgagactttggaaagcaaactacatggacaattggaaatgcacgggtatcctaaaggga
gatggtagtccagtatcgggtcagcctggtgctctgagtggcatcctgggatctgcaggt
gcacagagtgctctaaatggggccactggaagatag
DBGET
integrated database retrieval system
