Megalobrama amblycephala (Wuchang bream): 125278587
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Entry
125278587 CDS
T08212
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00100
Steroid biosynthesis
mamb01100
Metabolic pathways
Module
mamb_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125278587 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mamb01006
]
125278587 (fdft1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125278587 (fdft1)
Prenyltransferases [BR:
mamb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125278587 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GST_C_8
Motif
Other DBs
NCBI-GeneID:
125278587
NCBI-ProteinID:
XP_048063831
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All DBs
Position
LG11:complement(37646692..37662474)
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AA seq
447 aa
AA seq
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MAGVGGKSAASFSVLKRSFSLRGSPRSVLTGGRRSAQEGRLVARPPHPLRAHRHPAYVCF
SYQDSMSETLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIPL
EKKVPLLHDFHTFLYQPEWCFTESREKDRRVLEDFPTISVEFRNLGQEYRDVISDICHRM
GVGMAEFLEKKVASMKEWDKYCHYVAGLVGIGLSRLFSASQLEDVEVGRDTELANSMGLF
LQKTNIIRDYLEDQQQGRAFWPQEAWSQFASRLEDLAQPQHLSSALSCLNLLVTDALRHV
PDVIAYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATN
MGAVQSIIAQYSQEILQKVSVTDPSREKTLCILNLICEKSLSGAALSSRAHHISPVYVSA
AMLLAALSWQYLNATAGPPGGADMQGH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctggagttggcggaaagagcgcagcgtcgttctccgtgctcaagcgctcgttctcg
ctgcgcggctccccgcggtcggtgctcactggcgggcggcgcagcgcgcaggaagggcgg
ctggtggcccgccctcctcacccgctcagagctcaccgacaccccgcgtatgtgtgtttc
tcctaccaggactccatgagcgaaaccctgcggacctgctacgtgtatctgaaccagacc
agccggagcttcgcggcggtgattcaggccctggatggagaactgcggcatgctgtgtgt
attttctacctggttctacgagccctggacaccgtagaagacgacatgaccatcccgctg
gagaagaaggtcccgctgctgcacgacttccacacgttcctgtatcagcccgaatggtgc
ttcacagagagcagagagaaagaccgacgggtcctggaggatttccccacgatttcagtg
gagttcaggaacttgggccaagagtatcgggacgtcatttcagacatctgtcaccggatg
ggagtaggaatggctgaattcctggagaagaaagttgcttcaatgaaggagtgggacaaa
tactgtcattacgtggcgggtctggtggggatcggactgtcccgactcttctcagcgtcc
cagttggaggatgttgaggtgggccgggacacggagctggccaactccatgggtctgttc
ctccagaagaccaacatcatcagggactatctggaggaccagcagcagggacgggccttc
tggccgcaggaggcctggagtcagtttgcgtcccgtctggaggatttggcccagcctcag
cacctgagctccgccctgtcctgcctcaacctgctggtgaccgacgccctccgccacgtc
cctgatgtcatcgcgtacctctcccgcctccgcaaccagagcgtcttcaacttctgtgcc
attcctcaggtgatggcgatagcgactctgtctgcgtgctacaacaatcctcaggtgttt
cagggggtggtgaagatccggaagggtcaggcggtgacgctcatgatgcaggccacaaac
atgggcgccgttcagagcatcattgctcagtacagtcaggagatcctgcagaaagtctcc
gtcacggatccgtcccgggaaaagactctgtgtatcctgaatctcatctgtgagaagagc
ctgtccggagcggcgctgtcgtcccgagcgcaccacatctctccggtgtacgtgtcggcg
gccatgctgctggcggccctcagctggcagtacctgaacgccacggcgggaccaccaggg
ggcgcagacatgcagggacactga
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