Myxocyprinus asiaticus (Chinese sucker): 127416322
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Entry
127416322 CDS
T08782
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi00100
Steroid biosynthesis
masi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127416322
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
masi01006
]
127416322
Enzymes [BR:
masi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
127416322
Prenyltransferases [BR:
masi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
127416322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
TM1266-like
GST_C_8
GBP_C
Motif
Other DBs
NCBI-GeneID:
127416322
NCBI-ProteinID:
XP_051511577
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All DBs
Position
25:2106471..2122421
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AA seq
448 aa
AA seq
DB search
MAGVCGKSAVSFSVLKRSFSLRGSPRSVLSGGRRSAQEGRLVARPPHPLKTHRHPAFLCF
SCQDSMSEALRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIPL
EKKVPLLHDFHTFLYEPEWCFTDSREKDRQVLEDFPTISVEFRNLGQEYRDVISDICHRM
GVGMAEFLEKKVGSMNEWDEYCHYVAGLVGIGLSRLFSASQLEDPEVGRDTELANSMGLF
LQKTNIIRDYLEDQQEGRAFWPQEAWSQFASRLEDFAQPQNLSSALSCLNLLVTDALRHV
PDVITYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPHVFQGVVKIRKGQAVTLMMQATN
MSAVQSIIAQYSQEILQKVSITDPSREKTLCILSLIREKSLSPATLSSRAHHLSPVYVSA
AMLLAALSWQYLNATAGQPPGATDVQGH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtgtgtggtaagagcgccgtgtcgttctctgtgctcaagcgctcgttctcg
ctgcgcggctccccgcggtcggtgctctctggcgggcggcggagtgcgcaggaagggcgg
ctggtggctcgaccacctcacccgctcaagactcaccgacaccccgcgtttctgtgcttc
tcttgccaggactccatgagcgaagccctgcggacctgctacgcgtatctgaaccagacg
agccggagcttcgcggcggtgattcaggccctggacggagaactacggcatgcggtgtgt
atattctacctggttctgcgagctctggacacggttgaagacgacatgacgatcccgctg
gagaagaaggttccgttactgcatgattttcacacgttcctctatgagccggagtggtgc
ttcaccgacagcagagagaaagacagacaggtcctggaggattttcccacgatttcagtg
gagttcaggaatttgggccaggagtatcgggatgtaatttcagatatttgtcaccggatg
ggtgttgggatggcagaattcctggagaagaaagttggatccatgaatgagtgggacgag
tactgtcattacgtggcgggtctggttgggatcggactgtcccgtctgttctcagcgtct
cagctggaagatcccgaggtgggccgtgacacagaactggcgaactctatgggtctgttt
ctccagaagaccaacatcatcagagattacctggaggaccagcaggagggacgagccttc
tggccgcaggaggcctggagtcagtttgcatcgcgtctcgaagattttgctcagccacag
aatttaagctccgccctttcctgtctcaacctgctggtgaccgacgccctccgtcacgtc
cctgatgtcatcacgtatctgtcccgcctccgcaaccagagcgtcttcaatttctgtgcc
atcccgcaggtgatggcaatagcaactctttcagcatgctacaataaccctcacgtgttc
cagggcgtggtgaagatccgtaagggtcaggcggtcacgctcatgatgcaggccacaaac
atgagtgctgttcagagtataatcgcacagtacagtcaggagatcctgcagaaagtttcc
attacagatccgtctcgtgaaaagacgctgtgtatcttgagtctgatccgtgagaagagt
ctgtctcctgccacgctgtcatcccgagcacatcatctctctccggtctacgtgtctgcc
gcgatgctgttagcggctctcagctggcagtacctcaacgccacggccggacagccacca
ggtgccaccgatgtgcagggtcactga
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