KEGG   Mus musculus (house mouse): 219228
Entry
219228            CDS       T01002                                 
Symbol
Pcdh17, C030033F14Rik, Gm78
Name
(RefSeq) protocadherin 17
  KO
K16499  protocadherin delta 2
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    219228 (Pcdh17)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   219228 (Pcdh17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_4 NUC153 PepSY
Other DBs
NCBI-GeneID: 219228
NCBI-ProteinID: NP_001013775
MGI: 2684924
Ensembl: ENSMUSG00000035566
UniProt: E9PXF0 Q3UTP0 Q5HZI5
LinkDB
Position
14:84680626..84775005
AA seq 1157 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGSGSGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGLGGPGSVPFKLEENYDNFY
TVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQVH
ENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNY
EQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAG
LGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELV
VKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILLAA
MITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMNV
MNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQGTN
SSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQ
DTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECINCTDECRVLGHSDRCWMPQFPAAN
QAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAK
RALSPLLQEVPSASSSPTKACIEPCASTKGSLDGCEAKPGPLAEASSSYLPTDSQYPSPS
KQPRDPSFMASDQMARVFADVHSRARRASSEMGAVLEQLEQPNRDLGRESVDAEEVVREI
DKLLQDCRGNDPVAVRK
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgtacctttccatctgttgctgcttccttttgtgggcccctgccctgacactcaaaaac
ctcaattactcagtgccagaggagcaaggggccggcacggtgattggcaacatcggcaag
gatgcccgactgcagcccgggcttccgccggctgagcgcggcagcggcagcgggaggagc
aagtctggcagttaccgggtgctggagaactccgcaccgcatctgctggacgtggacgcc
gacagcgggctcctctacaccaaacagcgcatcgaccgtgagtccttatgccgccacaat
gccaagtgccagctctccctagaggttttcgctaacgacaaggagatttgcatgatcaag
gtagagatccaggacatcaacgacaacgctccctctttcccctcggatcagatagaaatg
gacatctcagagaacgcggcacccggcacccgcttccccctcacgagcgcacacgaccca
gacgctggcgagaacgggctccgcacctatctgctcacccgcgatgatcatggcctcttt
gccctggacgtcaagtcccgcggcgacggcaccaagttcccagagctggtcatccaaaag
gcactggaccgcgagctgcagaaccaccacactctggtgctgaccgccctagatggcggg
gagcctccacgctccgccaccgtacagatcaatgtgaaggtgatcgattccaatgacaac
agtccagtcttcgaggctccgtcatacttggtggaactgcccgagaacgctccactgggt
accgtggtcattgatttgaacgccactgatgctgatgaaggtcccaacggagaagtcctc
tactccttcagcagctatgtgcccgaccgcgtgcgggagctcttctccatcgatcctaaa
actggcctgatccgcgttaagggcaacctggactatgaggagaacggcatgttggagatc
gacgtgcaggccagagacctaggacctaacccaatcccagcccactgcaaggtcacagtc
aagcttatcgaccggaacgataacgcgccgtccattggtttcgtctccgtgcgccagggg
gcgctgagtgaggccgccccgcccggcacagtcatcgccctagtgcgggtcactgaccgg
gactcaggcaagaatgggcagcttcagtgtcgggttctaggtggaggagggactggaggt
ggcctggggggtcccggttccgtccccttcaagcttgaagagaactatgacaacttctat
accgtggtgactgaccgtccactggaccgtgagacacaagacgagtacaatgtgaccatt
gtggcccgggacgggggctcccctccacttaactccaccaagtccttcgccgtcaagatt
ctggatgagaatgacaatccgcctcggttcaccaaaggactttacgtgctccaagtacac
gagaacaacattccaggagaatacctcgggtcagtgctagcccaggatcccgacctgggc
caaaatgggacagtgtcatactccattcttccttcacacatcggcgacgtgtctatttac
acctatgtgtccgtgaaccccactaacggggccatatatgccctacgctcctttaactat
gaacaaacgaaggcttttgaattcaaagtactggctaaggactcaggggcgccagcgcac
ttggagagcaacgccacggtgagggtgacggttttagacgtgaacgacaacgctccagtg
attgtgcttcccacgctacagaatgacacagctgagctgcaggtcccgcgcaatgctggc
ctggggtacctggtaagcaccgtgcgcgccctggacagcgactttggagagagcgggcgc
ctcacctatgagatcgtggatggcaacgatgaccacctgtttgagatcgatccgtccagc
ggcgagatccgcacgctgcaccccttctgggaggatgtgaccccagtggtggagcttgtg
gtgaaggtgaccgatcatggcaagcccaccctttccgctgtggccaaacttatcatccgc
tcagtgagcggctccctgcctgaaggggtaccgcgagtgaatggcgagcagcaccactgg
gacatgtccctgcctctcatagtgacactgagcacgatttctatcatcctcctagcggcc
atgatcaccatcgctgtcaagtgtaaacgggaaaacaaggagattcgcacttacaactgc
cgcatcgccgagtacagccaccctcagctaggcggggggaagggcaagaagaagaaaatc
aacaaaaacgatatcatgctggtgcagagcgaggtggaggagaggaacgccatgaacgtc
atgaacgtggtgagcagtccctccctggccacctcccctatgtacttcgactaccaaacc
cgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctccaacaac
ctgactgtcccgcaggggcacgcaggctgccacaccagcttcaccggacaagggactaat
tcgagcgagacccctgccactcggatgtccataattcagacagacaattttcccgcagag
cccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaaggaccca
gaaagagccagcctgagagacagtgggcacggggacagcgatcaggcggacagtgaccaa
gacactaacaaaggctcctgctgtgacatgtcggttagggaggcactcaagatgaaaact
acttcaactaaaagtcagccactcgaacaagaaccagaagagtgcattaattgcacagat
gaatgccgagtgcttggtcattctgataggtgttggatgccacagttccctgcagccaat
caggctgaaaatgcagattaccgcacaaatctctttgtacccacagttgaagctaatgtt
gagactgagacttacgaaactgtgaatcccactgggaaaaagactttttgtacatttgga
aaagacaagcgagagcacactattctcattgccaatgtgaaaccttatttaaaagccaaa
cgtgccctgagccctctcctccaagaggtcccctcagcatctagcagcccaaccaaggca
tgcattgagccttgcgcctcaacaaaaggctccctggatggctgtgaagcaaaacctggg
cccttagcagaagcaagcagctcctacctgcccactgacagtcagtacccttcacccagt
aagcaaccaagagacccttccttcatggcttctgatcagatggcaagggtcttcgcggat
gtgcattccagagcccgtagggcttccagcgagatgggagctgtgttggagcagctggag
cagcccaacagggatctgggccgagagtccgtggatgccgaagaagttgtgagagagatt
gataagctcttgcaggactgccggggaaatgaccctgtggctgtgagaaagtga

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