Notothenia coriiceps (black rockcod): 104964092
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Entry
104964092 CDS
T04920
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104964092 (seh1l)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104964092 (seh1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104964092 (seh1l)
04131 Membrane trafficking [BR:
ncc04131
]
104964092 (seh1l)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104964092 (seh1l)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104964092 (seh1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
104964092
NCBI-ProteinID:
XP_010791115
UniProt:
A0A6I9PTN3
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MFVARSITADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNVNYGGKVQIYEYNENTRKYAKAETLMSVADAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPMRKESTSTGPTKLELQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTAMSTVVGSSVQTSQNTQNGMSAGRYFF
PPLDPPRAGTRYGHFLPPSSLIEHCDAEPIQPQQQALPHRLSRALLSLPEAEGQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagcgcgaagtatcacagcagatcataaagatctcattcatgatgtttcgtat
gatttccacggccggagaatggccacttgttccagtgaccaaagtgtgaaggtttgggac
aaaagtgagaacggagagtggcactgcacagccagctggaagacacacagcggctccgtg
tggagagtgacctgggctcacccagagttcgggcaggttctggcctcctgctcctttgac
aggaccgctgctgtgtgggaagagattgtaggggagtccaacgacaagcagagaggactg
agccactggattaagagaaccacactagtggacagtcgaacatcagtgactgatgtgaag
tttgcccctaaacacatgggcctgatgttgaccacctgctctgcggacggagtggtgagg
atctatgaggctcctgatgtgatgaacctgagtcagtggtccctgcagcacgagatctcc
tgcaagctcagctgcagctgcatctcctggaacccctcaagctctcgggcccacccacca
atgtttgcagtgggtagtgacgacagtaatgtgaattatggtggcaaagttcagatctat
gagtataatgaaaacacaaggaaatatgctaaagcagagaccctgatgagcgtcgcagat
gcagtccatgacattgcgtttgccccaaacctggggaggtctttccacgtgcttgctatt
gcaacaaaagatgtcaggatctttaaacttgttcctatgaggaaggagagcacctctaca
ggacccaccaagttggaattgcagattgtggcccagtttgataaccataactctcaggtg
tggcgtgtgagctggaacatcaccagcaccctgctggcctcctctggggatgatggctgt
gtgcgcctctggaaagctaactacatggacaactggaagtgcacgggaatcctgaaggga
gacggcagccccctcaccggctcatcgggtcagcccacagctatgagcactgtcgtgggc
tcctccgttcagacatcccagaacacccaaaacgggatgtctgcaggaaggtatttcttt
ccgcctctggaccctcccagagcggggaccaggtatggtcactttctgcctccctcctcc
ctgattgagcactgtgatgctgagcccattcagcctcagcaacaggctcttccccacaga
ctctccagagcactgctgtctttaccagaggctgaaggacagtga
DBGET
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