Nicotiana tabacum (common tobacco): 107790933
Help
Entry
107790933 CDS
T04643
Symbol
TSS
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00100
Steroid biosynthesis
nta00909
Sesquiterpenoid and triterpenoid biosynthesis
nta01100
Metabolic pathways
nta01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107790933 (TSS)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107790933 (TSS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nta01006
]
107790933 (TSS)
Enzymes [BR:
nta01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107790933 (TSS)
Prenyltransferases [BR:
nta01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107790933 (TSS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
107790933
NCBI-ProteinID:
NP_001312437
UniProt:
O24148
LinkDB
All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDQTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
EAILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgagggcgattttgaagaatccagatgatttgtatccattggtaaagctg
aagctagcggctcgacacgcggagaagcagatcccgccgtctccacattggggcttctgt
tactcaatgcttcataaggtttctcgtagctttgctctcgtcattcaacaacttcccgtc
gagcttcgtgacgccgtgtgcattttctatttggttcttcgagcacttgacactgttgag
gatgataccagcattcccaccgatgttaaagtacctattctgatctcttttcatcagcat
gtttatgatcgtgaatggcatttttcatgtggtacaaaagagtacaaggttctcatggac
cagttccatcatgtttcaactgcttttctggagcttaggaaacattatcagcaggcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaattcatatgcaaggaggtggaa
acaactgatgattatgacgaatattgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccatgcctctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatttggaagacataaatgaa
gtacccaagtgccgtatgttctggccccgtgaaatatggagtaaatatgttaacaagctt
gaggaattaaagtacgaggataactcggccaaagcagtgcaatgtctcaatgacatggtc
actaatgctttatcacatgtagaagattgtttgacttacatgtctgctttgcgtgatcct
tccatctttcgattctgtgctattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgagacgtggtctgactgctaag
gtcattgaccagaccaggactattgcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactctgaagaggctc
gaagctatcctgaaaacttgcagagattcgggaaccttgaacaaaaggaaatcctacata
atcaggagcgagcctaattacagtccagttctgattgttgtcatattcatcatactggct
attattcttgcacagctatctggaaaccgatcttag
DBGET
integrated database retrieval system
