Oncorhynchus nerka (sockeye salmon): 115135306
Help
Entry
115135306 CDS
T07952
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Module
one_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115135306
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
115135306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
115135306
NCBI-ProteinID:
XP_029525710
LinkDB
All DBs
Position
LG10:21715596..21748331
Genome browser
AA seq
572 aa
AA seq
DB search
MLTNKDSALEVYKEMLLLYLEEGKRLVNTNCEELEPWQIIGATLVSTLGAVWVKGFLFQQ
ETLTSRLKKQCFRLIRKIPFVGATIQNQLKKALADMSLSLCTLKEGMSYTKQLPEQGLSQ
VQVLDRIREYQTLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDLFPGVR
KMEAEIVRMACTLFNGGPNSCGTVTSGGTESILMACKAYRDMAYERGVKHPEIVAPVSVH
AAFDKAANYFGMKLVHIPLDKKTLKVDVKAMRRAINKNTAMLVCSAPQFPHGIIDPIEEV
GKLAVKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGFAPKGSS
VILYSDKQYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGEDGYIKTTKK
IIDTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSS
IHICCTVLHTQEGVAEQFISEVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEIS
CGFLDCLYSTEEPRSSQPQKTHINGNSNGKAH
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgctcactaacaaggatagtgccttggaggtgtacaaggagatgctactgctctacctg
gaggaaggcaagcggcttgtgaacaccaactgcgaggagctggaaccctggcagatcatt
ggagctactctcgtatctaccctaggagcagtctgggtcaaaggcttcttgtttcagcaa
gaaaccctgacatcccgactcaagaagcagtgctttcgactcatcagaaaaatacccttt
gttggcgcgacaatccagaaccagctgaaaaaggccctggctgacatgtctctcagtctt
tgcacactgaaggagggcatgagctacactaaacagctgcctgaacaagggcttagccaa
gttcaagttctagaccggatcagagagtatcaaacactgaatgaagtggattgggagaaa
ggacgagtttcaggcgcagtgtactggggagatcagacacttaccaaacttttggtgaag
gtatatggagactttgcatggagcaacccacttcacccagacctctttcccggtgtgagg
aagatggaggcagagattgtgagaatggcgtgtaccctcttcaacggtgggcccaactct
tgtggcacagtcacctccggaggaactgaaagcatattgatggcatgcaaggcgtacaga
gacatggcctatgagcggggtgtgaaacatcctgaaattgtcgcaccagtcagtgttcat
gcagcctttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggac
aagaagaccttgaaagtggatgttaaggctatgaggcgagccatcaacaagaacacagcc
atgctggtatgctccgcaccccagttcccccatggaatcattgatcctattgaggaagta
ggaaagctggctgtaaagtacaacctccctctgcatgtggatgcttgtttgggagggttt
ctaatagttttcatggccaaagccaattacccactggctccctttgacttcagggtaaag
ggtgtgaccagcatctctgcagacacacacaagtacggctttgcccccaaaggttcatca
gtgatcctgtatagtgacaaacagtacaggcattaccagtactttgtggctccagactgg
caggggggcatctatgcatccccatcagtggcaggttctcggccaggcggtatcatcgca
gcgtgctgggccaccatgatgtacatgggagaggatggctacataaagactacgaagaag
atcattgacactgcacgaactatcaagacagaaatccgtaagataaatggagtgtttgtg
tttggagaccctgaagtgtccgtggtggcaataggctctgacgtcttcgacattttccgt
ttatccaatgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagc
atccatatctgttgtacagtgctgcacacacaggaaggtgtggccgaacagttcatcagt
gaggtcaaagagcaggtggctctcattttgaagaaccccaatgagaagaccactggaatg
ggagcgatctatggcatggcccagtccatccctgacagatccatggtgacagagatctcc
tgcggtttcctggactgcctctacagcacagaggagccaaggtcctctcagccccagaag
acccatataaatggcaacagcaacggcaaagcccactga
DBGET
integrated database retrieval system
