Oryza sativa japonica (Japanese rice): 4331075
Help
Entry
4331075 CDS
T01015
Symbol
OsJ_08792
Name
(RefSeq) long chain base biosynthesis protein 1B
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00600
Sphingolipid metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
4331075 (OsJ_08792)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
osa01007
]
4331075 (OsJ_08792)
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
4331075 (OsJ_08792)
Amino acid related enzymes [BR:
osa01007
]
Aminotransferase (transaminase)
Class II
4331075 (OsJ_08792)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
AF2212-like
Motif
Other DBs
NCBI-GeneID:
4331075
NCBI-ProteinID:
NP_001403964
LinkDB
All DBs
Position
2:join(34960086..34960197,34960295..34960389,34960501..34960592,34960999..34961092,34961167..34961239,34961343..34961475,34961876..34962050,34962138..34962278,34962478..34962573,34962670..34962811,34963074..34963201,34963300..34963464)
Genome browser
AA seq
481 aa
AA seq
DB search
MEMVLPVANATAAALARVSAMFNAPLARAVVFGIHIDGHLVVEGLLIAAILFQLSRKSYK
PPKKPLTEREVDELCDEWQPEPLCPPIKEGARIEAPTLESAAGPHTIVDGKEVVNFASAN
YLGLIGNEKILDSCIGSVEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTQDSILYSYG
ISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASTLEKLTHG
NKRTEKIRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGLAE
HYGVPIEKIDIITAGMGNALATDGGFCTGSIRVVDHQRLSSSGYVFSASLPPYLASAAIS
AVDHLEENPSVLANLRSNITLLHKELSDVQGLEIASNILSPIVFLKLKTSTGSAVADLEL
LEVISEKVLKEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASV
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgttgccagtcgcgaacgcgactgctgcagcacttgcgcgggtttctgct
atgttcaatgccccgcttgctcgtgctgttgtctttgggattcatatcgatgggcacttg
gtcgtcgaagggcttctcattgccgcaatactcttccagctctccaggaagagctacaag
cctccaaagaagccactcactgagagggaggttgatgagctctgtgatgagtggcaacca
gagcctctctgcccacccatcaaggagggagctcggattgaggctcctacattagaaagt
gctgctggaccgcatacaattgttgatggaaaagaagttgtaaactttgcgtcagcaaac
taccttggtttgattggcaatgaaaagatactcgattcctgtattggttcggtggagaaa
tatggcgttggatcatgcggacctcgtggcttttatggaacgattgatgttcaccttgac
tgtgagactaaaattgcaaagttcctgggaacgcaagattcaatcttgtactcctatggg
atatcaaccatcttcagtgtgattcctgccttttgtaagaaaggagatataattgtagct
gatgagggtgttcattgggcagtacaaaatggtttgcagctttcaagaagcactgttgtt
tatttcaagcacaatgacatggcttcacttgcgagcactctggaaaaactaactcatgga
aacaaacgtacagaaaagattaggcgctatattgttgtggaagctatttaccagaattct
ggccaaattgcacccttggatgagatagttcgattgaaggagaaataccggtttcgtgtt
attttggaggagagtcattcttttggcgttcttggcaagtctggacgtggccttgctgaa
cattatggagttcctattgaaaaaatagacattatcactgctggaatgggaaatgcatta
gctactgatggtggtttctgtacaggaagtatcagagtggttgatcatcagcgtctaagc
agctccggttatgttttctctgcctcgttaccaccatatcttgctagtgcagcaatttct
gctgtggaccacctggaggagaacccatcggttcttgccaatctaagatcaaacatcact
cttctgcataaagagttgtcagatgtacaggggcttgaaattgctagtaatatattgtca
cctattgtcttcctcaaattgaagacatcaacaggttctgctgttgctgacctggagctc
cttgaggttatttcagagaaggtattgaaggaagattcagtcttcattgcagcgacgaaa
cgatcgagtttggacaagtgtcgtcttccggttggaatccgcctattcgtatcagctggt
cacactgaatctgatatcctcaaagtatctgaatccctgaaaagggttgcagcatcagtg
ctctag
DBGET
integrated database retrieval system
