Prunus dulcis (almond): 117638854
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Entry
117638854 CDS
T07328
Name
(RefSeq) squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00100
Steroid biosynthesis
pdul00909
Sesquiterpenoid and triterpenoid biosynthesis
pdul01100
Metabolic pathways
pdul01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117638854
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
117638854
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdul01006
]
117638854
Enzymes [BR:
pdul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
117638854
Prenyltransferases [BR:
pdul01006
]
Terpene biosynthesis
Squalene/phytoene synthase
117638854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
117638854
NCBI-ProteinID:
XP_034229901
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Position
8:complement(9529215..9536689)
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AA seq
412 aa
AA seq
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MGTLGTLMKHPDDIYPLLKLKMAAKNLEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTSIAADVKVPILIAFHRHIYDPDWHFSCGTKDYKVLMD
QFRHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHAADKENLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSDKAVQCLNDMVTNALIHMEDCLKYMAALRDPAIFKFCAIPQIMAIGTLALC
YNNIELFRGVVKMRRGLTAKVIDRTKSMDDVYGAFFDFSSILKSKVDKNDPNATKTLSRL
EAVQKTCRASGALSKRKSYIVKGEPSYNSTLIVALFIILAIVYAYLSASPRI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttggggactttgatgaaacatccggatgacatttacccgcttttgaagctc
aaaatggcagccaagaacttagagaagcagatccctccagagccccattgggctttctgt
tattccatgcttcacaaggtgtctcgtagttttgctctcgttattcaacagctcggcact
gagcttcgtaacgctgtctgtatattttatctggttcttcgagctctagacactgtcgag
gatgatacaagcattgcagcagatgtcaaagtccccatcttgatagcgtttcatcgtcac
atatatgaccccgattggcatttttcatgtggtacaaaggactacaaagttctcatggac
cagtttcgtcatgtttcaactgcttttttggaactcgggaaaggttatcaggaggcaatt
gaggatattaccaaaagaatgggtgcaggaatggcaaaatttatctgcaaggaggtagaa
accattgatgactatgatgagtactgccactatgtggcagggcttgttggtttaggtttg
tccaagcttttccacgctgctgataaggaaaatttggcctcagattctctctcaaattca
atgggcttatttcttcagaaaacaaacatcattcgggattatttggaggatattaatgag
ataccgaagtctcgtatgttttggccacgtcagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggaaaactcagacaaggctgtgcaatgcttgaatgacatggtc
actaatgcgttgatacatatggaagattgcttgaagtacatggctgctttaagagatcct
gcaatatttaaattttgtgccatccctcagatcatggcaattggcacgctggcattatgc
tacaacaacattgagctcttcagaggtgtagtcaaaatgaggaggggccttacagcaaaa
gtcattgaccgaacaaaatcaatggatgatgtctatggtgctttctttgatttttcttcc
attctaaagtccaaggttgacaagaatgaccctaatgcaacaaaaacattgagcagactg
gaagcagtacagaaaacatgcagagcctctggagccttgagcaaaaggaaatcctacatc
gtcaagggtgagccgagctacaattcaactctgattgtggcactgtttattatattggcc
atcgtttacgcttacctctctgccagcccaagaatctaa
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