Paenibacillus graminis: PGRAT_17960
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Entry
PGRAT_17960 CDS
T03325
Name
(GenBank) formate dehydrogenase
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00680
Methane metabolism
pgm00720
Other carbon fixation pathways
pgm01100
Metabolic pathways
pgm01120
Microbial metabolism in diverse environments
pgm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
PGRAT_17960
00680 Methane metabolism
PGRAT_17960
Enzymes [BR:
pgm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
PGRAT_17960
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AIQ69302
UniProt:
A0A089M7T7
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All DBs
Position
complement(4070822..4072966)
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AA seq
714 aa
AA seq
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MENKILTVCPYCGSGCQLYLLVENGQVVGAEPADGRTNEGNLCLKGHYGWDFLNDPQLLT
SRLRKPMIRKEGVLQEVSWEEAIGFTAEKLTAIKEKYGPDAIMGTGSARGPGNEANYVMQ
KFMRAAIGTNNIDHCARVCHGPSVAGLTYSLGDGAMSNSIPEIEDTDLLLIFGYNAAVTH
PIVARRIVKAKQKGATLIVADPRKTESARIADTWLPLKGGTNMALVNAFGHVLVTEELYD
KDYVSNFVQGFDEYKANVEKYTPEYAESITGVRAADIRKVMRQYAKSDKAMILYGMGVCQ
FAQAVDVVKGLASLALLTGHFGRESVGIGPVRGQNNVQGSCDMGALPNVFPGYQSVEDAK
IRKKFEKAWGTTLPDKTGYRLTEVPHLILKENKIKAYYIFGEDPVQSDPNAAELREALDQ
LELVIVQDIFMNKTALHADVILPATSWGEHDGVYSSADRGFQRIRKAIDPPGKVKPDWQI
ISEVSTAMGYPMAYKNSEEIWDEMRKLCPSFAGASYSKMEALGGVQWPCPSEDHPGTPYL
YEGNRFTTPSGKGQLFACEWRAPLEQPDADYPLTLSTVREVGHYSVRTMTGNCRALSQLS
DEPGNIQISLEDAAEHGIADGQLVQVYSRRGQIMARAQVSGRIKKGATYMTYHFWIGACN
ELTVDYLDPVSKTPEFKYCAIRLEAISDQAQAEASIRKQYAELRKQMLVGAVPE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataaaatattaactgtatgcccttattgcggcagcggctgccagctgtattta
ctagtcgagaatggacaggtcgtgggcgcagagcctgcagatggccggacgaacgaggga
aatctttgtctgaaaggccattacggctgggatttcctgaatgatccgcagctgctgacc
tcccgcctccgcaagcctatgatccgcaaggaaggcgtgcttcaagaggtgtcgtgggaa
gaggcgataggatttactgccgagaagcttaccgcgatcaaggaaaaatacggaccggat
gcgattatgggcacaggatcggccagaggaccgggcaatgaggccaattatgtcatgcaa
aagttcatgcgggcggccatcggaacgaataatatcgaccattgtgcgagggtctgccat
ggtccttctgttgcgggactgacgtattcgctgggagacggggcgatgtccaattcgatt
ccggaaattgaagacaccgatctgctgctgatttttggctataatgcagccgttacccac
ccgattgtggccagaagaattgtaaaagcgaaacagaagggggccacgctgattgttgcc
gacccccggaagaccgaatcggcacggattgccgacacctggctgcccctgaagggcggg
acgaacatggccctggtgaacgcttttggccatgtgcttgttacagaggagctgtatgac
aaggattatgtctccaattttgttcagggcttcgatgaatacaaggcgaatgtggagaag
tatacacctgaatatgcagagagtataaccggtgtgcgggcggcagatatccgtaaggtg
atgcgccaatatgccaaatccgacaaagcgatgattctctacggtatgggagtatgccag
tttgcccaggccgtggatgtggtcaagggattggcttcgcttgcgcttctgaccggacat
ttcggcagagaaagtgtcgggattggtccggtacgcggtcaaaataatgtgcagggctcc
tgcgacatgggcgcgctgcctaatgtctttcctggctaccagtctgtggaggatgccaaa
atccgcaagaaattcgagaaggcctggggcacaacccttccggataagacaggttaccgg
ctgacagaggtgccgcatctcatcctgaaggagaacaaaatcaaggcttactatatcttc
ggtgaagatccggtgcagagcgacccgaatgccgccgagctgcgggaggcgctggatcag
ctggagctggtgattgtccaggatatcttcatgaacaaaacagcgctgcacgccgatgtg
attctgcctgcaacctcctggggcgagcatgacggcgtctattcttcggccgaccgggga
ttccagcgcatccgtaaagcgatcgaccctcccggcaaggtgaagccggactggcagatc
atcagtgaagtgtctacggccatgggttacccgatggcttataagaattccgaggaaatc
tgggatgagatgcggaagctgtgtccaagcttcgccggagccagctacagcaagatggaa
gcacttggaggagttcagtggccgtgtccttccgaggatcatccggggaccccttacctg
tacgaagggaaccgatttaccacgccaagcggcaaaggacagctgttcgcctgtgaatgg
agagccccgctggagcagccggatgccgattatcctttgaccctctccacagtccgggag
gttgggcattattccgtgcgcacgatgaccggcaattgccgggcgctcagccagctgtcc
gatgagccggggaacatccagatcagtctggaggatgcggcggagcatggcatagcggac
ggccaattggtgcaggtctattcccggcggggccaaatcatggccagggcgcaggtcagc
ggccggatcaaaaaaggtgcaacctacatgacctatcatttctggatcggggcctgcaat
gagctgacggttgattatctggaccctgtctccaagacaccggaatttaaatactgcgcg
atacggcttgaagcaatatctgaccaggcacaggccgaagcttcgatccgcaaacagtac
gcggagctgagaaagcagatgctggtgggggcggtaccggaatga
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