Pteronotus mesoamericanus (Parnell's mustached bat): 129072552
Help
Entry
129072552 CDS
T09558
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam00100
Steroid biosynthesis
ppam01100
Metabolic pathways
Module
ppam_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129072552 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppam01006
]
129072552 (FDFT1)
Enzymes [BR:
ppam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129072552 (FDFT1)
Prenyltransferases [BR:
ppam01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129072552 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
GREB1_2nd
Motif
Other DBs
NCBI-GeneID:
129072552
NCBI-ProteinID:
XP_054432015
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MEEKLGAGASFFMAAAACGAKAMFLFKRTFVLSPAVAPRGTGTPRRCCPLPLATWLSKDW
PRGEGVCVRLLSPAAACRLLQSHSYFSTSATSVCVLCPQDSLSSSLKTCYKYLQQTSRSF
ASVIQELDEEMRHAVCIFYLVLRALDTLEDDMTISVEKKIPLLQNFHSHLYEPDWRFMES
KERDRQVLEDFPTISLEFRNLPVRYQTVIVDICQRMGSGMAEYVVKQVTSVQELEEYCHH
VAGLVGIGVSQLFVASELEDPLVSEDQKCANSLGLFLQKTNIIRDYLQDLKEGREFWPQE
VWSKYVKTLGDFAKPENIDSAVQCLNELVTNALHHIPDVITYLSRLRNQSVFNFCAIPQV
MAIATLAACYNNQQVFKGTVKIRKGQAATLMMDATNMPAVKALLYQYMEEIYHRIPDSDS
SSTKTREIISRIRTQNLPSCQLISRSHYSPIYLSFVMLLAALSWQYVSTLSQVTEDYLQT
GEH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacttggcgctggagcctcatttttcatggccgcagccgcttgcggcgcc
aaggccatgttccttttcaagcggacctttgtgctgagccccgccgtggcgccccggggc
acaggcactccccggcgctgctgccccttgcctttggccacctggctctccaaagactgg
ccgcggggagagggtgtctgcgttcggctactgagccctgcggctgcctgccgcctgctc
cagtcccactcctacttctcgacgtctgctacctccgtgtgtgttctctgcccgcaggac
tcgctcagcagcagcttgaaaacttgctacaagtatctgcagcagaccagtcgcagtttt
gcatctgttatccaggagctggatgaagaaatgcgccatgcagtatgtatattttacctg
gttctccgtgctctggatactctggaagatgacatgaccatcagtgtagaaaaaaagatc
ccactgttacagaacttccactctcacctttatgaacctgactggcggttcatggagagc
aaggagagggaccggcaagtgctagaggacttcccaacgatctcccttgagtttcgaaat
ctgcctgtgagatatcaaacagtgattgttgacatttgccagagaatgggatctgggatg
gcagagtatgtggttaagcaggtgacatcggtacaggagttggaagagtactgtcaccac
gttgccgggctggtgggaattggcgtttctcaactgttcgtggcctcagagctagaagac
cctttagtcagtgaagaccaaaagtgtgccaactctttgggcctgtttctgcagaaaaca
aacatcattcgtgattatctgcaagatctgaaagaaggaagagagttttggcctcaagag
gtttggagcaagtatgttaagacgctgggcgattttgcaaagccagagaatattgactcg
gccgtgcagtgtctgaatgaactcgtaaccaatgcactacaccacattccagatgtcatc
acctacctttccagacttagaaaccaaagtgtgtttaacttttgtgccattcctcaggta
atggccatagctactttggctgcctgttacaataatcagcaggtgttcaaagggacagtg
aagattcgaaaagggcaagcagcaaccttaatgatggatgccaccaacatgccagctgtc
aaagctttattataccagtatatggaagagatctaccacaggatccccgactcagactca
tcttctactaaaaccagggagatcatctccaggatcaggacacagaatcttcccagctgt
cagctgatctcccgaagccactactcccccatttacctgtcgttcgtcatgctcctggct
gctctgagctggcagtacgtgagcaccctgtcccaggttactgaagactatctccagacc
ggggaacactga
DBGET
integrated database retrieval system
