Pseudomonas putida BIRD-1: PPUBIRD1_2805
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Entry
PPUBIRD1_2805 CDS
T01975
Name
(GenBank) L-serine dehydratase, putative
KO
K17989
L-serine/L-threonine ammonia-lyase [EC:
4.3.1.17
4.3.1.19
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00260
Glycine, serine and threonine metabolism
ppb00270
Cysteine and methionine metabolism
ppb00290
Valine, leucine and isoleucine biosynthesis
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01200
Carbon metabolism
ppb01230
Biosynthesis of amino acids
Module
ppb_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPUBIRD1_2805
00270 Cysteine and methionine metabolism
PPUBIRD1_2805
00290 Valine, leucine and isoleucine biosynthesis
PPUBIRD1_2805
Enzymes [BR:
ppb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
PPUBIRD1_2805
4.3.1.19 threonine ammonia-lyase
PPUBIRD1_2805
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Gene cluster
GFIT
Motif
Pfam:
PALP
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
ADR60418
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Position
3161380..3162297
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AA seq
305 aa
AA seq
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MTLHIHTPLIESRPLSLAAGRNVWLKLDALQPCGSFKLRGVGHACEVHHARGARHFVSSS
GGNAGLAVAYAGRKLGVPVTVVVPETTTERAKQLLHLEDAKVVVHGSSWQEANALAQTLV
GPNDAFIHPFDDPLLWAGHASLVDEVAEAGLKPDAVVLSVGGGGLLSGVVEGLKRNGWGD
VPVLAVETEGAASLHAAMQAGHSVELERIASVATSLGAKRVADQALTCVQQHPVHSHLVS
DRAALEACERFLLDHRVLVEPACGAALAVAYDAKALGALRNVLVVVCGGATATLEQIRAW
LHQAD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcacattcatacccccctgatcgaatcgcgcccgctgtcgttggcggccggt
cgtaatgtctggctcaagctcgacgccctgcaaccctgcggttcgttcaaactgcgcggt
gtaggccacgcctgcgaggtacaccacgcgcgtggcgcccggcactttgtgtcctcgtca
ggtggcaatgccggtttggcagtcgcctacgccggacgcaagctgggggtgccggtgacc
gtggtggtacccgaaaccaccaccgaacgggccaagcagctgctgcacctggaagacgcc
aaggtggtggtgcacggcagttcatggcaagaggccaacgccctggcacagacactggta
ggcccgaacgatgctttcatccacccgttcgacgacccactgctgtgggcagggcatgcc
agcctggtggatgaagtggccgaagccggcctgaagccggacgcggtggtgttgtcagtc
ggcgggggcggcttgctcagtggcgtggtagaggggctcaagcgcaatggctggggcgat
gtgccggtgctggcagtggaaaccgagggcgcggcgtcgctgcatgcggccatgcaggct
gggcattcggtggagctggagcgcatcgcctcggtggcgacgtcgctgggggccaagcgt
gtggctgatcaggcgctgacgtgcgtgcagcagcatccggtgcacagccatctggtaagc
gatcgcgcagcgctggaggcctgtgagcggtttttgctggaccaccgtgtgctggtcgag
cccgcgtgcggggcggcgttggcagtggcctatgatgccaaggcactgggcgccttgcgc
aatgtactggtggtggtctgtggcggcgctaccgcaacactggagcagatccgggcctgg
ctgcatcaggcagactga
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