Polyodon spathula (Mississippi paddlefish): 121323660
Help
Entry
121323660 CDS
T07273
Name
(RefSeq) ceramide synthase 6-like
KO
K23727
sphingoid base N-palmitoyltransferase [EC:
2.3.1.291
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00600
Sphingolipid metabolism
pspa01100
Metabolic pathways
Module
pspa_M00094
Ceramide biosynthesis
pspa_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121323660
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.291 sphingoid base N-palmitoyltransferase
121323660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121323660
NCBI-ProteinID:
XP_041120784
LinkDB
All DBs
Position
11:12302943..12341608
Genome browser
AA seq
394 aa
AA seq
DB search
MTGILAWFWNERFWLPHNVTWADLKNTDEATFPQAEDLYLAFPLAFCIFMIRLVFERFIA
RPCALGLKIQAIGPQKAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRTIQHWFRQR
RNQEKPSTLSKFCESMWRFTFYLYIFTYGVRFLKKTSWLWDTRDCWYNYPYQALTTELHY
YYIIELAFYWSLMFSQFTDIKRKDFLIMLLHHLATISLITFSYVNNMVRVGTLVMCLHDV
SDVLLEAAKMANYVKCQRLCDLLFVMFGLVFISTRLAAFPIWILNTTVFESWDIVGPYPS
WWVFNLLFFLLLVLHSFWSYLIIKIACKAISKGKVGKWNPMHVSNDDQGDIESSSDEEDA
PSPAKKIHNTATNGTNGANGTNGYLTGTTCLDEH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtatattagcctggttttggaatgagaggttctggctcccacataatgtaacc
tgggcagatttaaaaaacacagacgaagcaaccttcccgcaagctgaggatctgtatctg
gcgtttcctttggcgttctgcattttcatgattcggctggtttttgaaaggtttattgca
agaccatgtgccttaggccttaaaatccaagcaattggaccacagaaagctcaacccaat
gctattcttgagaaggtcttcactgcaattaccaagcaccctgatgagaagagattagaa
ggcctttccaagcagctggactgggatgtgcgcaccattcaacactggtttcgacagcga
aggaaccaggagaaacccagtaccctcagcaaattctgcgagagcatgtggagatttaca
ttttatctgtatatatttacttatggagtgcggttcctaaaaaagacttcctggctttgg
gacacccgagattgctggtacaactacccataccaggctcttacaactgaacttcattac
tactacatcattgagctggcattctactggtccttaatgttctcccagtttactgatatc
aaaaggaaggactttttaattatgcttttgcatcaccttgccacaatctccctgataacc
ttctcttacgtaaacaatatggtgcgcgtaggaacactggtcatgtgccttcatgatgtg
tctgatgtgctgcttgaggctgctaaaatggcaaactatgtgaagtgtcaaagactgtgt
gacctcctgtttgtcatgtttgggttagtcttcattagtacccggcttgctgcttttcct
atctggatcttaaacacaacagtgtttgaaagctgggacattgttggtccgtatccatca
tggtgggtcttcaacttgctgttcttcctgcttctagtgctgcattccttttggtcatat
ctcatcataaagatagcctgcaaagccatttctaaaggaaaggtggggaaatggaatccc
atgcatgtatcaaatgatgatcagggtgacattgaatccagctccgatgaggaggatgca
ccatctcctgctaaaaagatacataacactgcaactaatgggaccaatggggcgaacgga
acaaacggatacctcactgggactacttgtctggacgaacactaa
DBGET
integrated database retrieval system
