Pseudoliparis swirei (Mariana hadal snailfish): 130199203
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Entry
130199203 CDS
T09868
Symbol
iqsec2b
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130199203 (iqsec2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199203 (iqsec2b)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130199203 (iqsec2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
PH
Cyclase_polyket
TSC22
PPL5
Motif
Other DBs
NCBI-GeneID:
130199203
NCBI-ProteinID:
XP_056278472
LinkDB
All DBs
Position
9:20470848..20501858
Genome browser
AA seq
1572 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLLDSQRRRIEELEGHLDRVSQENQDLRQDRSPQ
TPGSDTLEQNHSHSQPLSVPSHRGGGGGGGGGGGSGNGSTSTAQATAPAPTTPGPSRERR
THTRLTRGVSCSSSTAERDRLERTDTNTNTNSTIRRNVEGSQCPETGAHKDIQTPLSQKP
YLRGSERYTDSRTSSAPAAGPKDPSCVSASSSASLAWALRTRHQPASLALRKQEEEENKR
CKVLSDSYELSTDLQDKKVEMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERIRSSAS
ESRMTRRIILSNMRLQYSFDERQPQQQAQTQTSFTHNVAIGPPHTPDPNRPGDYTHLEDS
FSKQVKSLADSIDDALTCRAGRDDSQEGSREGGGLSEDFGECVWSSSSNPSSQRGVGGRA
RAAGGGLSMHGDSTATSYSDVTLYMDDGMPTSPLSLDRAPSSTDTEYWGPGGGVGGREDS
RDTEGGGSSNSRRSTPCTECKDYRLRGAHLPLLTIEPPSDSSVDMSDRSDRGSLNRQLVY
EQEPGVGACSPQGTLKHSPATGTRPPSTAAAQGQTRAPGRPVPTHIPQQVAAHHHHHPVH
HHQYADTPSSSSSPQQPPTTPLSSSSSTALPPGGLEEPCCSDGDNDSLNSTTNSNETVNC
SSGSSSQDSLREPLPPLGKQTYQRESRHSWDSPPFNSDVVQRRQYRIGLNLFNKKPEKGI
QYLIERGFVSDSPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDFSGMD
LDDALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPTLVRQFQNPDTIFILAFAIILLN
TDMYSPNIKAERKMKQEDFIKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHVSQVQ
AVERVIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRTGVHQREVFLFNDLLVVTKIFQK
KKTSVTYSFRQSFPLVEMQVHMFQNSYYPHGIRLTSALLGDERKVLIVFMAPSQQDRTRF
VSDLRESIAEVQEMEKYRVESELEKQKGVMRSSLLTGGVVGGVGVKSDVVNGTLGRTSFD
DSCLVGEGLKRTVLSSSLRDLSDPGKRGRSNSVGSLDSTMEGSIISSPQPHQRYPVPGVL
PGCYATEDFRPHRPILSPGSGVGGGPGQQHNTAGTGVGGLSSSAERAGAGSGPGGSSSNN
SGSFLGSLFGSKRAKPPGPLIPPGPPYPAPVPPPTTGGPPPHSPSSLCQMDGGPSKIQAL
HAQYCHVGAVQPPPPYYHHHRYHVQTVPPPLPGMPPHSMQRCPLPCRPPLGPPHGGHPQL
AHLSQLSQHGLPVRYANMVVGCPPPLSPLSQHSQNPQFALYHAQPPHSIRGGGVPGPKLP
LTMSHSYPHPHAHSQTHPGHVHTPHPASHSTHQTHFIFGTLPHNLPSASVNAHHAVSAGP
YLPQYPPLSSIPPPPPHSPLPPPLSPLTPLTPLSPPPPAPRAASAGAAGDGCWSDRHRGQ
LEIQAYQPDKYRGVSRMWGPRGQRSDYRVEEVGRARPRTKSARTESNSSSASDKRKRSLL
RLCYFHLRFPHM
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagcccagagagcccaaaccgggcagtggagtacctcctggagctcaacaac
atcatcgagagccaggccaagctcctggattcccagcgccggcgcatcgaggagctggag
ggccacctggaccgggttagccaagagaaccaggatctgaggcaggaccgcagcccacag
acgccaggttcggacactctcgagcagaaccacagccacagccagcctctgtccgtcccc
agccatcgtggtggtggcggcggcggcggcggcggtggcggcagcgggaatggtagcacc
tcgacggctcaggcgacagctccagcacctacaactccaggacccagcagggagaggagg
acccacaccaggctgacccgaggtgtctcctgcagctcctcaaccgccgagcgagaccgt
ctggagcgcaccgacaccaacaccaacaccaactccaccatacggagaaatgtggaaggc
tcccagtgtccggagacgggcgctcacaaagacatccagacgccactcagtcagaaaccg
tacctgcgcggctcagagcgctacactgacagcaggaccagcagcgcacccgccgccggt
cccaaggacccttcatgcgtgtccgcctccagttcagccagcttggcctgggcactgcga
acgcgccaccaaccggcgagtctggccctccgcaagcaagaggaagaggagaacaagaga
tgcaaggtcctttcagacagctatgagctctcgacggatctgcaggataagaaggtggag
atgctggagagaaagtacggcggctccttcgtcagtcgcagagcagcgaggaccattcag
acggccttcaggcagtatcgcatgaacaagaactttgagcgcatcagaagctcggcgtca
gagagccgcatgacacgccgcatcatcctgtccaacatgagactgcagtattccttcgat
gagcggcagcctcagcagcaggcccagacgcagacgagcttcacccacaacgtggccatc
gggcctcctcatacccccgacccgaaccgaccgggagactacacccacttagaggactcc
ttttccaaacaggtcaagtccttagctgactccatagacgatgccctcacctgccgcgcg
ggccgcgatgactcccaggagggcagcagggagggtggaggcctgagtgaagactttggg
gagtgtgtgtggagcagcagcagcaacccctcctcccaaagaggtgtgggaggacgagcc
agggcagccggaggaggcctcagtatgcacggcgacagcaccgccacctcgtacagcgac
gtcaccctgtacatggacgacggcatgccgacgtccccgctgtccctcgatcgggcgccc
agcagcacggacacggagtactggggccccggcggtggtgtcggagggcgtgaggacagc
agggacaccgagggagggggcagcagcaacagtcggcgcagcaccccgtgcaccgagtgc
aaggactaccgtctcagaggcgcccatctgcctctcctcaccatcgagccgcccagcgac
agctccgtggacatgagcgaccgctccgaccgcggctctctgaaccggcagctggtctac
gagcaggagccgggcgtcggggcgtgctcccctcagggaaccctcaagcactcccctgcc
acaggcacgcgtcctccctccacagcagctgcccagggtcagacccgggcccccggcaga
cccgtacccacgcacattcctcaacaagtggcggcacaccatcaccaccaccccgtccac
caccaccagtacgcggacacgccgtcgtcgtcgtcctccccccagcagccccccaccacc
cctctgtcctcctcctcctcgacggcgctgccccccggcggcctggaggagccgtgctgc
tcggacggggacaacgactcgctcaactccaccaccaactccaacgagacggtcaactgc
agctccggctcctcgtctcaggacagcctgcgggagcctctgccccctctggggaagcag
acctaccagcgagagagccgccacagctgggactccccgcctttcaacagcgacgtggtg
cagagacgccagtaccgcatcggtctcaacctcttcaacaagaagccagagaaagggatc
cagtacctgatcgagagaggtttcgtatcggactctccagtcgggattgctcgcttcatc
ttggagaggaagggcctcagccggcagatgattggagagttcctgggaaaccgacagaag
cagttcaataaagatgtgttagactgtgtggtggatgagatggacttctcgggaatggac
ctggatgatgctctcaggaagttccaggcacagatcaaagttcaaggagaagcccagaag
gtggaacggctcatagaagcttttagccagagatactgcgtgtgtaatccaacgctggtt
cggcagttccagaacccagacaccatcttcatcttagccttcgccatcatcctcctcaac
acggatatgtacagtcccaacatcaaagctgagcggaagatgaagcaagaggatttcatc
aagaatttaagaggcgtagacaatggccaggatatacccagggacctgctggttgggatc
tatcagcggatacagaaatgggagctgcggaccaacgatgaccacgtgtcacaagtgcaa
gcagtggagagagtcattgtgggcaagaagcctgtgctgtccctcccgcatcgtaggctg
gtatgctgttgccagctctatgaggtccctgaccccaacaggccgcagaggaccggggtg
caccagcgggaggttttcctctttaatgaccttctggtggtgaccaaaatcttccagaag
aagaaaacctcagtgacttatagtttcagacaatcgttccctctggttgagatgcaagtg
cacatgttccagaactcatactaccctcatggtatccgcctgacctcagcactcctgggt
gatgagaggaaggttcttatcgtctttatggcacccagtcagcaagaccgaacccgcttt
gttagcgacctcagggagagtattgctgaagtgcaagagatggagaaatacagagtggaa
tcggagctggagaaacagaaaggtgtgatgcggtccagcttgctcactggaggtgtggtt
ggaggcgttggtgtgaagagcgatgttgttaatggcaccctgggaaggaccagttttgat
gacagctgcttagtgggtgaaggtctcaaacgcacggtgctcagctcatctctcagggac
ctatcggatccagggaaacgtggtcgcagtaacagtgttggttctctggacagtaccatg
gaaggctccatcattagcagcccacagcctcaccagcgctatccggtgccaggcgtgttg
ccgggctgctacgcaacagaagactttcggcctcatcgccccatcctgagccccggatcg
ggggtggggggtgggccggggcaacaacacaacactgctgggaccggagttgggggactc
tccagcagtgcagagagagcaggagcggggagcgggcctggggggagcagcagcaacaac
agcggctccttcctgggttccctattcggcagcaaacgtgccaaaccaccagggcccctt
attccaccggggccaccgtaccccgcacctgtacccccaccgacgacgggagggccccct
cctcactccccttcatcgctgtgccagatggacgggggcccttccaagatccaggcgctg
cacgcacagtactgtcacgtgggagccgtgcagcccccgccaccgtactaccatcaccat
cgctaccacgtgcaaactgtcccgcctcctttgccaggcatgccccctcattctatgcag
agatgcccactaccctgccgcccaccgcttggccccccacacggggggcacccgcagctg
gcccatctctcccagctctcccagcatgggcttccggttcgctacgccaacatggtggtg
ggatgtcccccacccctttctcctctctcccaacattcccagaacccacagttcgccctg
taccacgcgcagcctccacactctatcagagggggcggcgtccctggccccaaactccca
ttaaccatgtctcactcctacccgcacccacacgcacactcccaaacccaccctggacac
gtgcacacgccacacccagccagccactccacccatcaaacacacttcatattcggcacc
ctgccccacaaccttccgtccgcctccgtcaatgcgcatcacgcggtttccgccggcccg
tatctgccccagtaccctccgctttcatctatcccccctcccccaccacattccccttta
cccccccctttgtccccccttacccctcttacacctctctcccctccccccccagcaccc
agggcagcctcagcaggggctgcaggtgacgggtgctggagtgacaggcacagggggcag
ctcgaaatccaagcctatcaaccggataagtaccgtggtgtgagcaggatgtggggcccc
aggggtcagaggtcagattatagagtggaggaggttggcagagcgaggcctaggaccaag
tctgcccggacagaaagtaacagcagcagcgcgagtgacaagaggaaacgcagtttgctt
cgtctctgttactttcacctccgtttcccacatatgtag
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integrated database retrieval system
