Pistacia vera (pistachio): 116119950
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Entry
116119950 CDS
T07386
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Module
pvy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116119950
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116119950
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
RVT_3
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
116119950
NCBI-ProteinID:
XP_031261749
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MELSQFDLQYRPKAAIKGQVVADFILEFSYQPVKDPKQQASEVTQETIQNLSTWSLYVDG
YLNRKMVGASLLFLSPKGTRIHSILRFGFKATNNEVEYEALLASLRLAKEMGSTAINIHS
DSMLDLLGRIYILSLISVVSIFFMNVYAENTFNVLDYGANGDGNSNGSLCNKSHIESAFE
KAWDETCNATEGTPTMIIPKGKTFLVYPMTFAGPCKSNNINIRLSGIVKAPDDLHAWQAS
ERGKWLVFNGISGLNISGFGLIDGSGKRWWDNSCKLKPIEGCTTLAPTNMGDDCISIGDY
VSKIKVSYVNCGPGHGISIGSLGRDGNEVQVENIIVRNVSFYKTTNGARIKTWQFIFYIC
DKKTGVHISSVRFSHSTKTSTTVVAINLSCNSNVPCTNINFEDIRLKLDTKGKHLVSSCN
NAYGHNLGIVEPRSCL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagtcagttcgatctacaatatagaccgaaagcggccattaaagggcaagtt
gttgccgatttcattttggagttctcataccaaccggttaaggatcccaagcaacaggcc
agcgaagtcacccaggaaaccattcagaatctatctacctggagcctctatgtcgacgga
tacttgaacaggaaaatggtcggggcaagccttctcttcctcagtcccaaagggactcgc
atccacagtatccttcggtttgggttcaaggcgaccaacaacgaagtagagtatgaagca
ttgctcgctagtctgcggttggcaaaagaaatggggtcaaccgcaattaacattcacagc
gactccatgctagatttattgggaagaatatatattttgagcctgatctcagtagtgtca
atatttttcatgaatgtgtatgctgagaatacatttaatgttttagattatggagcaaat
ggtgatggaaactcaaatggttccttgtgtaacaaatcccacattgaaagtgcatttgag
aaagcttgggacgaaacctgcaatgcaacggaaggcacaccaaccatgattattccaaag
ggaaagacatttctggtgtatcccatgaccttcgctggcccttgcaaatccaataacatc
aacatccgactgtcaggaatagtgaaggctccagatgatcttcatgcatggcaagcatct
gagaggggaaaatggctggtttttaatggcatttcagggctaaatatcagtggctttggc
ctcattgatggaagtggaaagaggtggtgggataattcatgcaaacttaaacccatagag
ggctgtacaacactggcacctacaaacatgggggatgattgcatctcgattggtgattat
gtttcaaagattaaagttagctatgtaaattgtggacctggtcatggtataagcattgga
agcttaggtagagatggaaatgaagtacaagtagaaaacatcattgtgagaaatgtttca
ttctacaagactaccaatggagcccggatcaagacttggcaatttatcttttatatatgt
gataagaaaactggagttcatataagcagtgtgcgattctcccattcgactaagacatcc
accaccgtggtggccatcaatcttagttgcaacagtaatgttccttgtaccaacatcaac
tttgaggatattcgattgaaattagacactaaaggaaaacatctcgtttctagctgcaac
aatgcttatggacacaatttaggaattgtagagccaagatcatgtctctga
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