Roseburia intestinalis XB6B4: RO1_22970
Help
Entry
RO1_22970 CDS
T02597
Name
(GenBank) LuxS protein involved in autoinducer AI2 synthesis
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00270
Cysteine and methionine metabolism
rix01100
Metabolic pathways
rix01230
Biosynthesis of amino acids
rix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RO1_22970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RO1_22970
Enzymes [BR:
rix01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
RO1_22970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LuxS
PDR_assoc
Motif
Other DBs
NCBI-ProteinID:
CBL12799
UniProt:
D4KZK9
LinkDB
All DBs
Position
complement(2323555..2324034)
Genome browser
AA seq
159 aa
AA seq
DB search
MEKIASFTIDHIKLEPGVYVSRKDTVGSEVITTFDLRMTSPNDEPVMNTAEVHTIEHLGA
TFLRNHPLYKDKTIYFGPMGCRTGFYLLLAGNYTSKDIVGLIIEMFEFIRDFHDEVPGAS
PKDCGNYLDMNLGMANYLASRYLENTLYDIDDAHLVYPA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatagcaagttttacgattgatcatattaaattagaacctggtgtctatgta
tcaagaaaagataccgtcggctccgaagtcatcactacattcgatctgcgcatgacttcc
ccaaacgatgaaccggttatgaataccgcagaagtacacacgatcgagcatcttggtgcc
acatttttaagaaatcatcctctttataaggataaaacgatctatttcggaccgatggga
tgccgcaccggattttatctgctgctcgcaggcaattacacatccaaagatatcgtaggg
ctcatcatagaaatgtttgaatttatccgcgattttcatgacgaagtacctggtgcctct
ccaaaggactgcggtaactacttagatatgaaccttggcatggcaaattatcttgccagc
cgttatttagagaacacactgtatgacattgatgatgcacatcttgtttatccagcttaa
DBGET
integrated database retrieval system
