Cupriavidus metallidurans: Rmet_5617
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Entry
Rmet_5617 CDS
T00351
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00100
Steroid biosynthesis
rme00909
Sesquiterpenoid and triterpenoid biosynthesis
rme01100
Metabolic pathways
rme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Rmet_5617
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Rmet_5617
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rme01006
]
Rmet_5617
Enzymes [BR:
rme01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Rmet_5617
Prenyltransferases [BR:
rme01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Rmet_5617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABF12476
UniProt:
Q1LBK0
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All DBs
Position
megaplasmid:2373890..2374951
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AA seq
353 aa
AA seq
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MPNPNRAFLLGPLLKGVSRSFYLTLRILPEGMRDPVGLAYLLARAADTIADTSLIPPVQR
LDLLLALRQHVNGTQNDGSLAQRLSAEVASQQTQSDEKVLLESIGPALGVLSQLDASDCT
AVRGIVDTLTEGMEFDLRTFPDERSGQVAALRTMDELDRYTYLVAGCVGEFWTTMTYAHQ
PGTLTAAPETMLRRGVRFGKALQMVNVLRDCGKDLRIGRCYLPTEILERHGMTPRDLMDP
ANALRARPILDELLHVSLAHFREAMAYTFAIPRTAIRLRLACLWPILIGLETLLLLAGNK
AWPDPAHVSKIPRGKVYRVLVRSTATVMSDTLLRRWMEDLIAQIEASLDGSTR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatccgaaccgggcctttctgctcggcccgctgctgaagggggtttcccgttcg
ttctacctgacgcttcgcatcctgcccgagggcatgcgcgaccccgtcggcctggcctat
ctgctggcacgcgccgcggacaccatcgcggatacctcgctgattccacccgtgcaacga
ctagacctgctgctggcgctacggcagcacgtcaacggcacccagaacgacggttcgctc
gcgcaacggctgagcgcggaagttgccagccagcaaacccaatccgacgagaaggtactg
ctggaatcgatcggccccgcgcttggcgtgctgagccagctcgatgcatctgattgcacc
gccgtccgcggtatcgtcgatacgctgaccgaaggcatggaattcgacctgcgcacgttc
cccgacgagcgctcgggccaggtggccgcgctgcggacgatggacgagctcgatcgctac
acgtatctcgtggccggttgtgtgggggagttctggaccacgatgacctatgcccaccag
ccgggcacgctgacggcagcgcccgagacgatgctgcgccgaggtgtccgcttcggcaag
gcattgcagatggtcaatgtgctgcgtgattgcggtaaggatctgcgcatcggccggtgc
tatctgccgaccgagatcctggagcgacatggcatgacgccacgcgacctgatggacccg
gccaatgcgctgcgcgcgcggccaattctggacgaactgctgcatgtctcgctcgcgcat
ttccgcgaagcgatggcctacacgttcgcgattccacgcacggcaatccggctgcggctg
gcctgcctgtggccgatcctgattggcctggagacgctgctgctattggccggcaacaag
gcctggcccgaccccgcgcacgtctcgaagatcccgcgcggcaaggtgtaccgggtgctt
gtgcgcagcacggcaacggtcatgtcggacacgctgctgcggcgctggatggaagacctg
atcgcgcagatcgaggccagcctcgacggttccacccgatag
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