Rattus norvegicus (rat): 303141
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Entry
303141 CDS
T01003
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04015
Rap1 signaling pathway
rno04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
303141 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
303141 (Rapgef6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
303141
NCBI-ProteinID:
NP_001100473
RGD:
1307645
Ensembl:
ENSRNOG00000009995
UniProt:
A6HEI1
LinkDB
All DBs
Position
10:39156573..39324947
Genome browser
AA seq
1606 aa
AA seq
DB search
MNSPVDPGARQALRKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLMSTRARYERYNG
NQMLFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTIIDGVDVNNYLSLPADLTKMHLTDNPH
PQVTHVTSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEI
DRTDPLQGRDLVRECLEKEPADKTDDDVEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKIENLFMGNSFGIVPTLDKQHMRGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLETPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLTGGSEKGFGVFVEVVEPGTKAADAGLKRGDQIMEVNGQNFENITFAKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQVPQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCQA
VQEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELLKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KQFEDIVNQETFWVATEILSESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRHIIRMTSANMDPAMMFRQRSLSQGSTNSNMLD
VQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDIDTEEEKFQMMSLQWEPAYGT
LTKSLTEKKSARSSEMSPVPLRSAGHTAKVHLHQPHRVSQVLQVPAVNLHPIRKKGQTRD
HVLSTNLPQKGLGPTEEVSGKKHTEDTISVASSLHSSPPASPQSSPRKGCTLTPSSKCDN
LSDSSHSEISSRSSIVSNGSVDSMSAAGQDERCSAHSLAVPEPTGAWEKTDHPSGISDHS
QLAHGWMLSKPSLIKGVAVSSSLSSEEMSQEHVVLEAADSGRGSWTSCSSSSHDNFQSLQ
NQKSWDFLNSYRHTHLGDPIAEVEPPDCEPCACPKGCSRTCSQCKGSLETNQLRQSWASS
SSLSDTWEPNYGTVKRRVLESTPAEAPDGLEPRDTSDPVYKTVTSSTDKGLIVYCVTSPK
KGDRHREPPPTPPGYLGISLADLKEGSHPHLKPPDYSVAVQRSKMMLLNSLSRLPPAPPS
SHTSAWVPSKIGSQPQRHSLQPSHPKLADVADADSEADENEQVSAV
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccctggcgctcggcaggcactgaggaagaagccgccggagcgg
actcctgaggacttaaatattatttattcctatctccatgggatggaaatactatcaaac
ctcagggagcatcagcttaggttaatgtctacaagagcacgctatgagagatacaatggc
aatcaaatgcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtacttgtaaaagattctatggtccttcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagaaccttcagaaatgattgtggtagaaaat
tccaaagacaatgaagatagtatattacaaagagaaattcctgccagacagtctcgacga
aggtttcggaaaattaactataagggagaacgccaaaccataatcgatggggtggatgtt
aataactacctttcgcttccagcagatcttaccaagatgcacctcacggacaaccctcat
ccacaggtcactcatgtgacttctagtcagtctggctgtagcattgccagtgactctggg
agcagcagtttatccgatatctatcaggctacagagagtgaagtaggagatgtagattta
acccgtcttcctgaaggacctgttgattctgaggatgaagaggaggaggaggaagagatt
gatcgaacagatccactgcagggtcgagatcttgtccgggaatgtcttgaaaaggaacct
gcagacaaaactgatgatgatgttgagcagttacttgagttcatgcaccagctacctgcc
tttgcgaacatgaccatgtctgtaaggagagagctctgctctgtcatgatttttgaagta
gtagagcaggctggggctgttattcttgaagatgggcaagagcttgactcgtggtatgtc
attttaaatggcactgtagaaattagccatccagatgggaaaattgaaaatctcttcatg
ggaaatagttttggaatcgtgcccactctggataagcagcacatgcgtggagttgtcaga
accaaagtcgatgattgtcagtttgtctgcatagcccaacaggactattggagaatttta
aatcatgttgaaaaaaacacccataaagttgaggaagagggagaaatcgtcatggtacat
gagcaccgtgagctagaccggagtggaactagaaaaggacacatcgtgatcaaggcgaca
cctgagcgtctcatcatgcatttgatagaagagcattctattgtggacccaacttatata
gaagatttcctattaacttacagaacatttcttgaaactcctttggatgttgggatcaag
cttttagaatggtttaagattgacagcttaagggataaggtgacccggattgtactctta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctagaa
gaatttgaaaaaaatttggaagatacaaaaatgaacggtcacctcagattactgaacatc
gcctgtgctgcaaaggctaagtggaggcaggttgtactgcagaaggcgtcccgtgagtcc
ccgctacacttcagcctcacgggaggcagcgagaagggatttggtgtctttgtagaagta
gtggagcctggtaccaaagctgctgacgcaggactgaaacggggtgatcagataatggaa
gtcaatgggcaaaactttgagaatattacgtttgctaaagcccttgaaattttgaggaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagaattgctcagt
aggactgaacaagagaaatctggtgtccctcatattcccaaaattgctgaaaaaaaaagt
aatcgtcattctattcaagatgtcccaggggatattgagcaggtgccacaggagaaagga
aacaagaaaattaaagcaaataccgtttcaggtggaagaaataaaatcaggaaaattttg
gataaaacaagatttagtatcttgcctccaaaactatttagtgacggaggcctgagtcaa
tcacaagatgacagcattgtgggaaccaggcactgtaggcacagcctggctatcatgcca
attcctggaacactgtcatccagcagcccagatctcttacagcctaccactagcatgttg
gacttttccaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagctgctacattatcatcagtaaagataccacagctaaagaagtggtctgccaagct
gtacaggaatttggtttgactggtgcatctgacacatactctctctgtgaagtttctgtt
actcctgagggtgttataaagcagagaagacttccggaccagttctccaaattagctgat
agaattcaactcaatggaaggtattacctaaaaaataacatggagacagaaacattgtgt
tctgatgaagatgcccaggaactactgaaagaaagccagctctccatgctgcagctcagc
accatcgaggttgccacccagctgtcaatgagggactttgatttgtttcgtaacattgag
cctactgaatatattgatgatctttttaaattagattccaaaacaggaaatactcacttg
aaacagtttgaggatattgtaaaccaagagacattctgggttgccacagagattctaagt
gagtcaaaccagctgaaaagaatgaagattattaaacattttattaaaattgcccttcat
tgccgagaatgcaagaatttcaattccatgtttgcaataataagtggcttgaacctggca
ccagtagcacgactcagaggcacctgggaaaagttaccaagcaaatatgagaaacacctt
caagatctacaagacctttttgatccatctagaaacatggcaaaatacagaaatattctt
agtagtcagagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acattccttcatgaaggaaatgactccaaagtagatggcttagtaaacttcgagaagcta
agaatgattgccaaggaaatccgtcatattattcgaatgacttctgctaacatggaccct
gccatgatgtttcgccagaggtcattgagtcaaggcagcacaaattctaacatgctagat
gttcagggaggggctcacaaaaaaagagcacgccgcagctcactgctgaatgccaagaaa
ctgtatgaagatgcccaaatggcaaggaaagtgaaacagtatctttctagtctggacata
gacacagaggaggagaagttccagatgatgtcactgcagtgggagcctgcatatggtacc
ttgacaaagagcttaactgaaaaaaagtcagccagatcatctgagatgtctcctgtgccg
ttgaggtcagctggccacacagctaaagtccacttgcaccagccacacagagtgagccag
gtgcttcaggtgccagcagttaacttgcaccccatccggaagaaaggacaaaccagagac
catgtgctgagtacaaatttacctcagaaaggtttaggaccaactgaagaagtgagtggt
aagaaacacacagaagatactatttctgtagcgtcctctctacactctagtcctcctgca
tctcctcagagctcccctcgcaaaggttgtacactcacaccatcaagtaaatgtgacaac
ttatctgactccagccacagtgaaatctcctctcggtccagcattgtgagcaatggttct
gttgactccatgtcggcagctggacaggatgaacgctgttcggcccacagcctagcagtt
cctgagcccaccggggcatgggaaaagacagatcacccttcggggatctcagaccacagt
cagcttgctcacgggtggatgctgtcaaagccatctcttatcaagggcgtagccgtctcg
tcttctctgagcagcgaagagatgtctcaggagcatgttgtgctggaggcagctgacagt
ggtcggggcagttggacatcctgttccagcagctcccatgacaacttccagagccttcag
aatcaaaagagctgggactttctgaactcctacagacacacgcatctaggcgaccctatt
gctgaagttgagccccctgactgtgagccctgcgcctgtcctaaaggttgctcaagaact
tgtagccagtgcaaaggcagcctagagacgaaccagctgaggcagagttgggcctcatcc
agctcactgtctgacacgtgggaaccaaactacgggacagtcaagcggagggttttggaa
agtacaccagcagaggcacctgatggcttggagcccagggataccagtgaccccgtttat
aaaactgtcacttccagtacagacaagggcttgattgtgtactgtgtcacctcacccaag
aaaggtgataggcatagggagccacctcccactcctccaggatatctgggaatttcctta
gcggacctaaaggaaggatcccacccgcacctaaaacctccagactatagtgtggcagta
caaagatcaaagatgatgcttcttaacagcctgtctagactgccgccagctcctcccagt
agccacacctcggcctgggttccctcgaagatcggatcccagcctcaaaggcatagcttg
cagccgtcccatcccaaactagcagatgtggctgatgcagatagcgaagcagatgagaat
gagcaggtgtcagcagtctag
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integrated database retrieval system
