Ruditapes philippinarum (Manila clam): 132732338
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Entry
132732338 CDS
T09557
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132732338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132732338
03012 Translation factors [BR:
rphi03012
]
132732338
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132732338
mRNA cycle factors
Stress granule specific factors
132732338
Translation factors [BR:
rphi03012
]
Eukaryotic type
Initiation factors
eIF-4
132732338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
132732338
NCBI-ProteinID:
XP_060574727
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MAAKAGKKGKKKGTTMALTDFLSDETGAAQGPGSSYVLANKSMDWAAEMEELDIDSEPTY
GMQAVDRAKLPTAPKASRGPEDLAKVPTDPPFTAFIGNLPYEATEEKITEFFRKLPVMNV
RLPEDNGRLRGFGYVQFETREALIDALSMSEEAFGGRKVRIDLAGESQGDNRKGGGRRDD
GQPDRTEGDWRRSEGRQESSSFNDRGQGRYDDRGPSRYDDRRDDRGFGDRGSGRYGDRRE
GGFDDRRGGGGFDDRRGGGGFDDRRGGGGFDDRRGGGGFDDRRGGGGFEDRGGFGRRDDR
GFGRDDRRDDRYGGGGGGGRFEDRDGGRRQFGGGFRRDDRGGDERGWERGGGGFHGDRDR
GGYGGDRGQDDRQDRPDREPEAPRERPRLQLQPRTKPVENPPETKPSEDKPRPEKPKAAS
IFGSAKPVDTAQREREIEEKLLKQKTDTTQPKSSLESRGYGTSKGYEEPPQRKYEHDNKE
NRNVPSSRRRTGSERSEEGDGRRERRSSGSSKGKKGSTSQSRSRQDSGEQGSHPEVFSGG
EEDKSHNALSPAHRDETVKLVPAPAPKENIWEKRKSTQTAQSPPQKAEERKPPAQESTQS
DSHQSPPNMRERNQSSRSNRTSSQSSTDSTPSKREGKKEFVPAEPPKENPWMKRKQEREQ
HQPSGKREPGPTPVANQQNVPNAWAGRGGGDRGRGRGGRGGFGRGRGEPPRQKEKKEKPL
PQSIDEMPKFEEKKNKDFSDGNKFAGLVDDDDGDSYDEES
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaaggctggcaaaaaagggaagaagaaggggacaaccatggccctgactgat
ttcctgtctgatgagacaggggcagctcaggggccaggctctagctatgttcttgctaat
aaaagtatggattgggcagctgaaatggaggagttagatattgattctgaacctacctat
ggtatgcaagcagtagatcgagcaaaactcccaactgctccaaaagcgtccagaggtcct
gaggatcttgctaaagtaccaacagatccaccatttacagcatttataggcaatttacca
tatgaagctacagaagagaaaataactgaatttttcagaaaactaccggtgatgaatgtc
agacttccagaagacaatggaagactgagagggtttggatatgttcagtttgagactaga
gaagctctcatagatgccttgtctatgtcagaagaggcatttgggggtcgtaaagtgaga
attgacttggcaggggagtctcaaggagataacagaaaaggtggtggtaggagagatgat
ggccaaccagacagaacagaaggtgattggagaaggtcagagggcagacaagagtcttct
agttttaatgatagaggtcaaggtcgctatgacgacaggggtccaagccgatatgacgac
agaagagatgatagaggttttggagatcggggatctggtcgatacggtgatagaagagaa
ggtggatttgacgatcgtcgtggcggtggtgggtttgacgaccgcagaggcggtggtgga
ttcgatgatcgtcgtggcggcggtggattcgatgaccgtcgtggcggtggtggatttgat
gaccgtcgtggtggagggggattcgaagaccgcgggggatttgggagacgagatgaccgt
ggatttggtagagatgacaggagggatgatagatatggcggtggtggtggtggcggacgt
tttgaagatagagatggtggtagacgtcagtttggaggaggattcagacgagatgatcga
gggggtgatgagaggggctgggagagagggggaggtggtttccatggtgacagagataga
ggaggttatggtggagacaggggtcaggacgatagacaagatagaccggatcgtgaacca
gaagcaccgagagaaagaccacggctacaactacaaccgaggacaaaaccggtggagaat
ccgccagaaacaaaacccagcgaagataaaccaagaccagaaaaaccaaaggctgcgtct
atatttggcagtgcaaaacctgtggacactgcacagagggagagggaaatagaggagaag
ttgttgaaacagaagactgacacaactcagcctaagagttccctcgagtcccgaggctat
ggtacctcgaagggatacgaggaacctccccagaggaaatatgagcatgataataaagaa
aatagaaatgtaccaagttcacgaagacgtacaggaagtgagcgttcagaagaaggtgac
ggtcgtagagaaagaagatccagtggcagctcaaaggggaaaaaaggctcaacatctcag
agcagatctcggcaggacagtggtgagcagggatcgcacccagaggtgttctccggcggt
gaggaggacaagtcgcacaatgctctatcgccagcacacagggatgagacagtcaaactg
gttcctgctccagcacctaaagaaaatatctgggagaagagaaagtctactcagacggcc
caatcacctcctcagaaagcagaagagaggaaacctccagcacaggagagtactcagtct
gattcccaccaatcacctccaaacatgcgtgagagaaaccagtccagccggtcaaataga
acgtcgtcacagtctagtacggattcgacaccatcaaagcgagaagggaagaaagagttt
gtgccagccgagcccccgaaggaaaacccgtggatgaaacggaaacaagaacgagagcag
catcaaccttctggtaaaagagaacccggaccaactcctgtagctaaccagcaaaatgtc
ccaaatgcctgggcaggtcgtggaggcggggacagaggtagagggcgcggtggaagagga
ggattcggtcggggccgtggtgaaccccctcgccaaaaggaaaagaaagagaaaccatta
ccccagtcaatagatgaaatgcctaaatttgaagagaaaaagaataaggatttcagtgat
ggtaacaagtttgcaggacttgtagatgatgatgacggtgattcttatgatgaggaatca
tag
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