Rahnella victoriana: J9880_13600
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Entry
J9880_13600 CDS
T07871
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
rvc
Rahnella victoriana
Pathway
rvc00680
Methane metabolism
rvc00720
Other carbon fixation pathways
rvc01100
Metabolic pathways
rvc01120
Microbial metabolism in diverse environments
rvc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
J9880_13600 (fdhF)
00680 Methane metabolism
J9880_13600 (fdhF)
Enzymes [BR:
rvc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
J9880_13600 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Tex_YqgF
PLD_C
Motif
Other DBs
NCBI-ProteinID:
UHM89354
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All DBs
Position
complement(2920478..2922649)
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AA seq
723 aa
AA seq
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MKKVTTVCPYCGAGCKLNLVVDNGKIIRAEAANGVTNQGELCLKGYYGWDFLNDTKLLTP
RLTQPMIRRQKGGKFEAVSWDEAIRYTAQRLKEIKQKHGPRAIMTTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVCHGPSVAGLQATLGNGAMSNSIGDIENSKCLLVIGYNCADS
HPIVARRVIKAKEKGAQIIVCDPRRIETARIADQHLQIKNGCNMALVNAFAHVLIEENLY
DHDYVAKYTEGFEEYRKNVADYSPEAVAEQTGVSAQQIRQAMRTYAAAPSATIMWGMGVT
QFGQAVDVVKGLAGLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNEFPGYQSVTDP
KVRAKFADAWGIDVNQMDDKIGHRITEIPHLAMEGKVKAYYIMGEDPLQTEADLGLVRKG
FEALEFVVVQDIFMTKTAEQADVILPATSWGEHGGVFSCADRGFQRFEKAIEPKYNVKRD
WDIISLLATEMGYPMHYRDNQEIWDEMRNLCPLFYGATYEKMGELGHVQWPCTTLESPGT
QYLYADNHFDTPTGKGQLFAAPWRAPAEVPDGDYPLVLCTVREVGHYSCRSMTGNCAALQ
TLADEPGFVQMNPVDAQALGIRDQQLVWVASRRGKVISRANYNERINLGAVYMTYQWWIG
ACNELTQDNLDPISKTPETKYCAVKVEQIADQRWAENYAQQSYSDMKTRLRSAVEDVIPV
VEI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcaccactgtctgcccgtattgcggggccggatgtaaattgaatctggtt
gtggataacggaaaaatcatccgcgcagaagctgcgaacggggtgaccaatcagggcgag
ttatgcctgaaaggttactacggctgggattttctcaatgacaccaaactgctgaccccg
cgcctgacgcaaccgatgatccgccgtcagaaaggcggaaaattcgaagcggtcagctgg
gatgaagctatccgctacaccgcgcagcgcctgaaagagatcaaacaaaaacacggcccg
cgcgccatcatgaccaccggttcttcccgtggtaccggcaatgaaaccaactacgtgatg
cagaaatttgcccgtgcggtgatcggcaccaacaacgtcgactgctgcgcccgcgtgtgt
cacggcccgtcggtcgccggtttacaggccacgctcggtaacggcgcgatgagtaattcc
atcggcgatatcgagaactcaaaatgcctgctggtgatcggctataactgcgccgattcc
catccgatcgtcgctcgtcgggtgatcaaagccaaagaaaaaggcgcacagattatcgtc
tgcgatccgcgccgcatcgaaacagcgcgtattgccgatcagcatctgcaaatcaaaaac
ggctgcaacatggcactggtgaatgctttcgcccatgtgctgatcgaagaaaatctgtat
gaccacgactatgtggcgaaatacaccgaaggctttgaggaataccgcaaaaatgtcgcg
gattactcaccggaagccgtggctgagcagaccggcgtgtccgcacagcaaatccgtcag
gccatgcgcacttacgcggcggcaccttccgccaccattatgtggggcatgggcgtcacg
cagtttggtcaggcggtggacgtggtgaaaggtctggcgggtctggcattgctgaccggt
aaccttggccgcgccaacgtcggcgtcggcccggtgcgtggtcagaataacgtgcagggt
gcctgcgacatgggtgtgctgccgaatgaattcccgggttaccagtccgtcaccgatccg
aaagtgcgggcgaaattcgccgatgcctggggcattgatgtcaaccagatggacgacaaa
atcggtcaccgcatcactgaaatcccgcatctggcgatggaaggcaaggtgaaagcctat
tacatcatgggcgaagatccgttgcagaccgaagccgatttagggctggtacgcaaaggg
ttcgaggcactggaattcgtggtggtgcaggacatcttcatgaccaaaaccgctgaacag
gcggacgtgattttaccggcaacgtcatggggcgagcacggcggcgtgttctcctgcgcg
gatcgcggcttccagcgtttcgagaaagccatcgaaccgaaatacaacgtcaagcgcgac
tgggacatcatcagcctgctggcgaccgagatgggttatccgatgcattaccgcgataac
caggaaatctgggacgaaatgcgcaacctgtgcccgctgttctacggtgcgacctacgaa
aaaatgggcgaactgggacatgtgcagtggccctgcaccacgctggaaagtccggggaca
caatacctgtacgccgacaatcatttcgataccccgaccggcaaaggccagttgttcgcc
gcaccgtggcgcgcaccggcggaagtgccggacggcgattatccgctggtgctgtgcacc
gtgcgcgaagtcggtcactactcctgccgttcgatgaccggtaactgcgccgccctgcaa
acgctggctgatgaaccgggctttgtgcagatgaatccggtggatgcacaggcgctgggc
attcgcgatcagcaactggtctgggtggcgtcgcgtcgcggtaaggtcatttcccgcgcc
aactacaacgagcgtattaacctcggtgcggtgtacatgacctatcagtggtggattggt
gcctgtaatgaactgacacaggacaacctcgatccgatttccaaaacgccggaaaccaaa
tactgcgcagtgaaagtcgaacaaatcgccgatcaacgctgggccgaaaactatgcccag
caaagctacagcgacatgaaaacgcgcctgcgcagcgccgttgaagatgtgatcccggtg
gttgagatttag
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