Sinocyclocheilus anshuiensis: 107661354
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Entry
107661354 CDS
T04917
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh00100
Steroid biosynthesis
sanh01100
Metabolic pathways
Module
sanh_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107661354
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sanh01006
]
107661354
Enzymes [BR:
sanh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107661354
Prenyltransferases [BR:
sanh01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107661354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GBP_C
GST_C_8
Motif
Other DBs
NCBI-GeneID:
107661354
NCBI-ProteinID:
XP_016306363
UniProt:
A0A671N0Y2
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MAGVGGKSAVSFSVLKRSFSLRGSPRSVLTGGRRSAQEGRLVARAPHPLRTHRHPAYVCF
SCQDSMSETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPL
EKKVPLLQDFHTFLYQPEWSFAESREKDRQVLEDFPTISVEFRNLGQEYRDVISDICHRM
GVGMAEFLEKKVSCMKEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGRDTELANSMGLF
LQKTNIIRDYLEDQQEGRAFWPQEAWSQFTARLEDFSHPQHLSSALSCLNLLVTDALRHV
PDVIAYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATN
MCAVQSIIAQYSQEILQKVSVTDPSREKTLFILSVIREKSLSPAVLSSRAHHISPVYVSA
VMLLAALSWQYLNATAGQPPGGADMHGH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtcggcggtaagagcgccgtgtcgttctccgtgctcaagcgctcattctcg
ctgcgcggctccccgcgctcggtgctcacgggcgggcgtcggagcgcgcaggaagggcgg
ctggtggcccgtgctcctcacccgctccggactcaccgacaccccgcgtatgtgtgcttc
tcctgccaggactccatgagcgaaaccctgcggacctgctacgcgtatctgaaccagacc
agccggagcttcgcggcggtgatccaggccctggacggagagctgcggcatgcggtgtgt
attttctacctggttctgcgagctctggacacagtggaggacgacatgagcatcccgctg
gagaagaaagtcccgttactgcaggacttccacacgttcctctatcagcccgaatggagc
ttcgccgagagccgagagaaagaccggcaggtgctggaggatttccccacgatttcggtg
gagttcaggaatttgggccaggagtatcgtgacgtgatttcagacatttgtcaccggatg
ggtgtgggaatggccgaattcctggagaagaaggtgtcttgcatgaaggaatgggacaag
tactgtcattatgtggcgggtctggtggggatcggtctgtcccgtctgttctccgcgtcc
cagctggaggatgctgaggtgggccgggacacggagctggcgaactccatgggtctgttc
ctccagaagaccaacatcatcagggactatctggaggaccagcaggagggaagggctttc
tggccgcaggaggcctggagtcagttcacggcccgtctggaggatttctcccatcctcag
cacctgagctccgctctgtcctgcctcaacctgctggtgaccgacgccctccgccacgtc
ccagacgtcatcgcatacctctcccgcctccgcaaccagagcgtcttcaacttctgtgcc
attcctcaggtgatggcgatagcgactctgtcggcgtgctacaacaatcctcaggtgttt
cagggtgtggtgaagatccggaagggtcaggccgtgacgctcatgatgcaggctacaaac
atgtgcgccgtccagagcatcatcgcacagtacagtcaagagatcctgcagaaggtttcc
gtcacagacccgtcccgggagaagactctgtttatcctgagtgtcatccgtgagaagagc
ctgtctccagccgtgctgtcgtcccgcgcgcaccacatctctccggtctacgtctcggcc
gtcatgctgttagcggcactcagctggcagtatctgaacgccacggccgggcagccacca
gggggcgcagacatgcatggacactga
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