Salmo salar (Atlantic salmon): 106605261
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Entry
106605261 CDS
T04363
Name
(RefSeq) WD repeat-containing protein mio
KO
K20407
SEA/GATOR complex protein SEA4/MIOS
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
106605261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605261
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
106605261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIOS_WD40
MIOS_a-sol
zinc_ribbon_16
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
106605261
NCBI-ProteinID:
XP_014056177
UniProt:
A0A1S3RWD2
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Position
ssa05:complement(54888998..54897858)
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AA seq
880 aa
AA seq
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MSGSKPDILWSPHHADRYVICDSELGLYRIRPVGSGETKAGALPLSVETAATLLAINSDT
PYMKCVAWYPKHEPECLLAVGQANGRVVLTSLGQSHNSKCKELMGKEFVPKHARQCNTLA
WNPVDSNWLAAGLDKHRADFSVLIWDISSKFSPEASVAAEKIRLSSGDTDSGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKTFVNTKAIQGVTVDPHFPDR
VASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRMGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPSNSLIGSFAWHPTSQNRMVVVSAANRAMTDFTVFERISL
AWSSTTSLMWACGRHLYECAEEVGGEGTVEKDIATKMRQRAQSRYGHDTVQVWKNHLLAG
GDDPQLKSLWYTLFFMKQYTEDMEQKQQGSKQALVYSGIKNIVKSSSGTTENRRCWSGSD
RQTDVPRFHSEERSLALRLCGWINRGPDINVEPFLRSLEGEGEWERAAAVALFNLDIRRA
IQILNKGASAERGDLNLNVVAMALSGYTDEKSSLWREMCSSLRLQLKNPYLCVMFAFLTS
EPGTYDGVLYESSVAVTDRVAFACMFLNDAQLPRYMEKLTSEMKEVGNLEGILLTGLTKD
GVDLMESYVDRTGDVQTASFCMLKGSPGEVVKDPRVQCWIENYRNLLDAWRFWHKRAEFD
IHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAMPHQGRGFSQYGVSGSPTKSKVTSCPG
CRKPLPRCALCLMNMGTPVSNCPGTGHGTGKSDEKVDLTRENKLAQFNNWFTWCHNCRHG
GHAGHILSWFRDHTECPVSACTCKCMQLDTTGNLVPSDSH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcaaagccagacattttgtggtctccccaccacgcggaccgctatgtcatc
tgtgactcagagcttggactgtaccgcatcagacctgtggggagcggcgagaccaaagcc
ggagctctccccctctctgtggagaccgccgctaccctattagcgatcaactctgacacc
ccatacatgaaatgtgtggcctggtacccaaagcacgagcctgaatgtctgctagcagtt
ggacaggcgaacggcagggtagtcctcactagcctaggccagagccacaactctaagtgc
aaggagctgatggggaaggagtttgtgcccaagcatgcacgtcaatgcaacaccctagcc
tggaaccctgtggacagcaactggctagccgccgggttggacaagcacagagcagacttc
tcagtgctcatatgggacattagcagtaagttctccccagaggctagtgtagccgctgaa
aagatccgtctctcgtcaggagacacagactctggcctagtggtgactaagcccctgtat
gagctaggccagaacgatgcttgcctgtccctctgctggctgccccgtgaccagaagctg
ctcctggctggcatgcaccgcaacctggccatctttgacctgcgcaacaccagccagaag
accttcgtcaacaccaaggccatacagggtgtgacagtggacccccacttccctgaccgc
gtggcctctttcttcgagggccaggtggccatctgggacctgcgcaagtttgagaagcca
gtgctcacgctcaccgagcagcccaagccgctcaccaaggtggcctggtgccccacgcgt
atgggcctgttggccacgctgacgcgtgacagcaacataatccgcctttacgacatgcag
cacacgcccacgcccatcggcgacgagacagagcccacgatcatcgagcgcagcgtgcag
cccagcaacagcctcattggcagcttcgcctggcaccccacttcccagaaccgcatggtg
gtggtttcggctgccaaccgcgccatgactgacttcacagtgttcgaacgtatctcttta
gcctggagctccaccacttcgctcatgtgggcctgcggcaggcacctgtatgagtgtgcc
gaggaggtgggaggggagggtacagtagagaaggacatagccactaagatgaggcagagg
gcacagtccaggtacggtcatgatacggtccaggtgtggaagaaccatttgctggccgga
ggggacgacccccagctcaagtctctgtggtacactctgttcttcatgaagcagtacact
gaagacatggagcagaaacagcaggggagcaaacaggccctggtctactcaggcatcaag
aatatagtcaagtccagctcaggcactacagagaaccggcggtgctggagcggctcagac
cgccagacggacgtccccaggttccacagcgaggagcgcagccttgcccttcgtctgtgc
ggctggatcaaccgaggccccgacatcaacgtggagcccttcctgcgctccctggagggg
gagggcgagtgggagcgtgcggccgccgtggccctcttcaacctggacatccgtagggcc
atccagatcctcaacaagggagcctccgctgagagaggggacctgaacctaaacgtggtt
gccatggcgttgtccggctacacggacgagaagagttccctgtggagggagatgtgcagc
tctctgaggctgcagctcaagaacccctacctgtgtgtcatgtttgccttcctcaccagt
gagcctggcacctacgacggagtactgtatgagagtagtgtggcggtaacggaccgagtg
gccttcgcatgcatgttccttaacgacgcacagctgcctcgctacatggagaagctgacc
agtgagatgaaggaggtggggaacctggaggggatcctgctgacggggctgaccaaagac
ggagtggacctgatggagagctacgtggaccggaccggagacgtccagaccgccagcttc
tgcatgctcaagggttccccaggggaggtggtgaaggacccgcgtgtccagtgctggatc
gagaactaccgtaacctgctggacgcatggaggttctggcacaaacgggctgagtttgac
atccacaggagcaagctggaccccagctccaaaccactggcacaggtgtttgtgagctgt
aacttctgtgggaagtccatatcgtacagctgctcggccatgccccaccagggccgcggc
ttcagccagtacggggtcagcggctcgcccaccaagtcaaaggtcaccagctgtcccggc
tgcaggaagcccctcccccgctgtgccctctgcctcatgaacatgggcacgcctgtgtcc
aactgcccaggtactggacatggcacggggaagtcagacgagaaagtggatctgaccagg
gaaaacaaattggcccagttcaacaactggttcacctggtgccacaactgtcgccatggc
ggccatgcaggtcacatactcagctggtttagggaccatacagagtgtccagtgtcggcc
tgcacctgtaagtgcatgcagctggacaccacaggaaacctggtgccttcagacagccac
tag
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