Sugiyamaella lignohabitans: AWJ20_5332
Help
Entry
AWJ20_5332 CDS
T05270
Symbol
RTC1
Name
(RefSeq) Rtc1p
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_5332 (RTC1)
Membrane trafficking [BR:
slb04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
AWJ20_5332 (RTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-RING_16
WDR54
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
30037562
NCBI-ProteinID:
XP_018736838
UniProt:
A0A167EQU9
LinkDB
All DBs
Position
D:2226840..2230454
Genome browser
AA seq
1204 aa
AA seq
DB search
MPGGNSGGEGLSGTGSASGFLKSSSSSSTPAPDRHGMFSMESPPSGGPSGSGSSSGNHTS
YANIAAMAIKSGPLARIGKALYSGVSGASSSVPNSIPGSIPASPSFYSGYSDGGKRADTT
GGSPASSTSTNIGHYTDMTDDDEDETSLKYTARGGIFAMANSPSKEHVAIVGKDFFQVLN
VSNTNVSLSHNVRGGSSATSGNRDFDKTFSATALKWGYQSFDRYIALSNAGGRIFVYDAE
KGSIGSGIRRPVSQLLDSTRNIHSLAFNPNQGYNLLSASSDGTVKLWDLRENPKHPALVF
VKKGGDPCREVQWSPFEPRRFAAIYDSGVIQRWDLRQPQTYDRRINAHSGAGQSLDWHPE
KDYIVSGGRDQQLQVWNMSNDSSRSPDYVIHTPSSVAKVRWLANNNGRNNSIINSGLISC
GRSKGDNLLCVWDIKRPYIPINAIERHTDSITDICYRNERYIWSCSKDKTFRQHSLLFEP
LLISNLSSSAFTWSSTNDLLFVSQDKDRPSVIGIPISDDTLGSEQSHQHLSNRRPSMNVD
MSGSPGSVTGVSNTNNSNSRRSASSQRPRSQLDPVSLSFSPIVCSANFPGNDPNIFKYCA
QHYQLVPRPQETIADVCLHNSKVASAVNKLRTGQVWLMLAEAVEDELNRYYSFLMAPQQN
QERQEHEEEKKIDNAEQKSHSTKVQILLPPPNLPPPNQDNSLSPVFPETAAGIGRFEKAS
SSYNNSVTNHQAVARGDPSSSNTQPMTIGGRSKGNTSNDVTVAPNMSFSLTGSHRYSFDT
TGSSPDDSYGGIKDSTGASYTHISMLSSSVRRARNYSTSTHISSGTEGGSSSASLGPVQE
FPATESVGTSNQTGELDLVGKSIAEWKSRTLDDIKEDVSDSSYVASNNGGVGTPVNSTIG
NSSILIPGVRSVVNTERLQNSVSSSKLSAALLGKSSSPGEPSSPVNLSNQSHAHTHGHSL
SSATTSQGASNSATGSKMGYMSNASSRNAQQTFKQFVSTQTCPWRTEVLVAKAAEFAMDQ
GDVQLCAVLAAVFLQNYPRICASHRTAEEWIVSYVGLLKRQGLFVAAASLTKICKFKSVR
KIAKNDTTLDTLCHSCHAPLSENAAIVKEKVAKLAQQAAGTDYDEDEDPSAIPVASSIEE
IGYYYCQTCKRLLDGCTLCRAPVRGLALVLLECGHKAHPLCLKEWVFQEGMVECPSGCGT
SLVR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaggaaattcgggtggtgaaggtttgtcaggcactgggtcggcatcgggcttt
ttgaaatcgagctcttcatcttctacgcccgctcccgataggcatggaatgttcagtatg
gaatcacctccctcgggtggcccgtcaggatctggctcgtcatctggaaatcatacctct
tatgctaatatagcggcaatggctatcaaatcgggtccattggcaagaatcggcaaggcc
ttgtatagtggagtgtctggggcttcatcatcagtaccgaactcaattcctggttcaatt
cctgcatctccttcattctattcagggtactcagatggtggtaaacgagctgatactaca
ggtggatcacctgcttcttctacgtcaacgaatattggacattataccgacatgactgac
gacgatgaagatgaaacttcgctcaaatatacagctcgtggtggtatattcgccatggct
aattcaccatcaaaagagcatgttgccattgttggtaaggatttcttccaggtgctaaat
gtatcgaataccaatgtgtccttgtctcataatgttagaggtggaagttcagctacatcc
ggaaaccgtgattttgataagactttcagtgccactgctttgaaatgggggtatcaatca
tttgataggtatattgcgttgtcaaatgccggaggtaggatttttgtatatgatgcagag
aagggctccataggatctggcatccgtagaccagtgtctcagctactagactcgacaaga
aacattcactctttggcatttaatcctaatcagggctataatttgctatctgctagttca
gatggtactgtcaagctgtgggatcttagagaaaatccaaaacatcctgcattagttttt
gtcaagaaaggaggagacccatgtcgagaagtccaatggagtccgtttgaacctcggcgt
tttgctgcgatatatgattccggtgtaattcaaaggtgggacttgcgacagccacaaact
tatgatcgtagaataaatgcacattcgggtgctggacaaagtcttgactggcatcctgaa
aaggactacattgtgtccggtggccgtgaccaacagctccaagtatggaatatgagtaat
gacagttctcgtagtcctgattatgtgattcatactcccagttcagttgcaaaagttcgc
tggctggcaaataacaacggacgcaataacagtattattaatagcggcctaatatcctgt
ggacgaagtaaaggcgacaacctgttgtgtgtttgggatataaaacgaccatacatccct
ataaacgctattgaacgccatacagatagtatcactgatatttgttatcgaaacgagcga
tatatttggagttgttccaaagacaagacttttcgacagcacagcttactatttgagcct
ctactaatctccaacctttcctcgagtgcctttacctggtcatcgacaaatgatttacta
tttgtatcgcaagacaaagataggccgagtgtcattggtatacccatatcagacgacacg
ctaggcagtgaacaatcccatcagcatctaagcaatagacgacccagcatgaatgtagac
atgagtggcagtccaggatctgtcactggagttagcaataccaataatagtaatagtaga
cgatctgctagtagccaacgtcccaggagccaacttgacccagtatctttgtcgttttcg
cccattgtatgtagtgcaaattttcctggcaatgatccaaatatttttaaatactgtgct
caacactatcaactggtaccaaggccacaggaaaccattgctgacgtatgtcttcataac
agtaaagtggccagtgctgtcaataaactaagaacaggacaagtctggctcatgctagca
gaagctgtggaggatgagcttaatagatattatagcttccttatggcaccccaacaaaat
caggaaagacaggaacatgaagaagaaaagaagatagacaatgcagaacaaaaatcacat
tctaccaaagtacagatattattgcctccacctaatttgcctccacccaatcaggacaac
agtttgtcgccagtatttcctgaaactgctgcaggcattggtaggtttgaaaaggcttct
tcaagctataataatagtgtaacgaaccaccaggcggtcgcgagaggagacccgtccagt
tcaaatactcagcccatgacaattggaggccgatccaaaggtaatacctctaatgatgtc
actgttgccccgaacatgagtttctcgctgactggtagccatcgttactcgtttgatact
actggtagctcgccagatgactcgtatgggggtattaaggactctacaggtgcaagttat
acacatatatccatgttgagttcatcagtgcggcgagcaagaaactattctacctcgaca
catattagtagtggcactgagggcggcagtagtagtgctagtttgggccctgttcaagag
tttccagcaactgaatcagtgggcacttctaaccaaacaggtgaactagatctcgtaggc
aaaagtatcgccgagtggaagtctcgcactttggacgatataaaggaagacgtttctgac
agtagctatgtggcgtcgaataatggaggagttgggacccctgttaatagcactattggt
aacagcagtatcctcataccaggagtcaggtcagttgtcaatacagaaagactgcagaat
tctgtttcttcttctaaactgtcagctgctttgttgggcaaaagcagctctcctggagag
cccagtagccctgtcaatctgtcaaatcagagccatgctcatactcatggccacagttta
agctctgcaactacaagccaaggggcaagtaactcagccactggatctaaaatgggatat
atgtcgaatgccagttctcgtaacgcgcagcaaacatttaaacaatttgtttccacgcag
acatgcccttggcgaacagaggtattagtcgccaaagctgccgagtttgcaatggaccaa
ggagatgttcagttgtgtgctgtattagcagctgtttttcttcagaactaccctcgtatt
tgtgcgtcacatcgcactgccgaagagtggattgtgtcatatgttggcctacttaaacgt
caaggactttttgttgctgctgccagtttaacaaaaatctgtaagttcaagtctgtccgc
aaaattgccaaaaatgataccacacttgatactttatgccacagttgtcatgcacctttg
agcgagaacgcagctattgtcaaagaaaaagtcgccaaactggcccaacaagctgctgga
actgactatgacgaagatgaggatccgtcagccattcctgttgcaagcagtattgaagaa
atcggttattattactgtcaaacctgcaaaagactgctagatgggtgtactctttgccgt
gctccggtccgtggtttggctcttgtgctgcttgagtgtggtcacaaagctcacccgcta
tgtctcaaagaatgggttttccaggaaggtatggttgaatgcccttcaggatgtggcacc
tcgcttgtcagataa
DBGET
integrated database retrieval system
