Shewanella loihica: Shew_2882
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Entry
Shew_2882 CDS
T00489
Name
(GenBank) quorum-sensing autoinducer 2 (AI-2), LuxS
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
slo
Shewanella loihica
Pathway
slo00270
Cysteine and methionine metabolism
slo01100
Metabolic pathways
slo01230
Biosynthesis of amino acids
slo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Shew_2882
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew_2882
Enzymes [BR:
slo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
Shew_2882
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Gene cluster
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Motif
Pfam:
LuxS
AMG1_II
Motif
Other DBs
NCBI-ProteinID:
ABO24748
UniProt:
A3QH00
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All DBs
Position
complement(3422269..3422778)
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AA seq
169 aa
AA seq
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MPLLDSFTVDHTRMNAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILSERGIHTLEHLF
AGFMRDHLNSDRVEIIDISPMGCRTGFYMSLIGTPKEAEVAECWLAAMEDVLKVKQQSEI
PELNEYQCGTYEMHSLEQAKEIAKNIIAAGVNVNRNDDLKLSDEILKGL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccgttactcgatagcttcaccgtagatcatacccgcatgaacgcccctgccgtgcgc
gtcgccaagacgatgaccacccccaagggcgataccattaccgtcttcgatctgcgtttc
tgcgtgcctaataaggagatcctgagcgagcgcggcattcacaccctggagcatctcttt
gctggctttatgcgtgaccacctcaacagcgatcgtgtcgagatcatcgatatctcgccc
atgggttgtcgtaccggtttctacatgagcctcatcggcacgccgaaagaggccgaagtg
gccgagtgttggttggccgccatggaagatgtgctcaaggtcaagcagcagtctgagatc
cctgagctgaacgaataccagtgtggcacctatgagatgcactctttggagcaggccaag
gagatcgccaagaacatcatcgccgccggggtgaatgtgaatcgcaatgacgatctgaaa
cttagcgatgagatcctaaagggtctgtaa
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