Sideroxydans lithotrophicus: Slit_1955
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Entry
Slit_1955 CDS
T01196
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00270
Cysteine and methionine metabolism
slt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Slit_1955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slt03000
]
Slit_1955
03032 DNA replication proteins [BR:
slt03032
]
Slit_1955
03036 Chromosome and associated proteins [BR:
slt03036
]
Slit_1955
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
slt02048
]
Slit_1955
Enzymes [BR:
slt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Slit_1955
Transcription factors [BR:
slt03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Slit_1955
DNA replication proteins [BR:
slt03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Slit_1955
Chromosome and associated proteins [BR:
slt03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Slit_1955
Prokaryotic defense system [BR:
slt02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Slit_1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ADE12184
UniProt:
D5CT98
LinkDB
All DBs
Position
1973916..1975745
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AA seq
609 aa
AA seq
DB search
MLTPQYIMDLNDEIIIDNFAGGGGASTGFELALGRHVDVAINHDPEAVSMHQANHPQTRH
YCESVWEVDPRTVHPGRKIGALWLSPDCKHFSKAKGGKPVEKKIRGLAWVALRWVAIRKP
RRLFLENVEEFITWGPLVSDANGNMRPCPKNKGREFNAFVNALRRHGYVVDWKELRASDY
DTPTIRKRLFLVARCDGQPIVWPEATHGAPDSEKVKSGWLLPWRTAAECIDWSLPCPSIF
LTKEEGRAIGVNRPLADNTLRRVAKGIMRYVVNAAEPFIVPLTHHGADRRTGMEQPLPTV
TAAHRGEMALIQPFITEHANGSNQRNMPADEPLRTQCAQVKGGHFAVVQPFISTYYGDKR
PGDVRGISMDEPLHTQTTENRHALVSAFMAKHYGGVVGHSLNDEPLHTITSSDHNSLVTA
HIVGAGGPVYSGKPKAIDEPFGTMTAENHRALVTSNIVKMRGTNVGQDNREPLHTISAQG
THFAEVRSFLIKYYGTDQDPQLREPLHTVTTKDRYGLVTVHGEEYAIVDIGMRMLAPREL
FRAQGFPEKYIIDRGLHIDADGNHHWKPLTKSAQVRMCGNSVCPPLAAALIRANCADMIV
SKEVKRRSA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccgcaatacatcatggacctgaacgacgagatcatcatcgataactttgcc
ggcggtggcggggcttcaactggtttcgaattggcgcttgggcgacatgtggacgtggcg
atcaaccacgatccggaggcggtctccatgcaccaggcaaaccatccgcagacgcgacat
tattgcgaatcagtttgggaagttgacccgcgtaccgttcatcccggccggaagatcggc
gcgctatggctttctcctgactgcaagcacttcagcaaagccaagggcggcaaaccagtc
gaaaagaagattcgcggtctcgcctgggtggcattgcgctgggtagccatccgcaagccc
cgccgcctgtttctggaaaatgtcgaagaattcattacttgggggccgctagtatccgat
gccaacggcaacatgcggccatgcccaaagaacaaggggcgcgagttcaatgcattcgtc
aatgccctgcgccgtcacggttatgttgtggattggaaagaattgcgtgccagcgactat
gacactccgaccattcgcaaacgcctatttcttgttgcgcgctgcgatggtcagccgatt
gtctggccagaagcaacccacggcgcgccggatagtgaaaaggttaagagtggatggctg
ctgccatggcgcaccgctgctgagtgtatcgactggtctctaccatgcccgtctatcttt
ctgaccaaagaggaaggccgcgctatcggcgtaaaccggcctttggcggacaacacattg
cgccgagtagccaagggcatcatgcgttacgtggtcaatgccgccgagccgttcattgtg
ccgctcacccaccacggcgccgaccgccgcactggcatggaacagccgctgccgaccgtt
actgccgctcatcgtggcgaaatggcgctgatacaaccgttcatcaccgaacacgccaac
ggctccaatcagcggaacatgccagcagacgaaccgctgcgcacgcaatgcgcccaggtc
aagggcggacacttcgcggtcgttcagccttttatctcgacttattacggtgacaagcgc
ccgggcgatgtgcgcggtatcagcatggatgaacctctgcatacgcaaaccaccgagaat
cgacatgcgctggtatccgccttcatggcaaagcactacggcggcgtggtcggtcacagc
cttaacgacgaaccgctgcataccatcaccagtagcgatcacaattctctggtgacggcc
cacatcgttggcgctggcggccccgtctacagcggaaaaccaaaagctattgatgagccg
ttcggtaccatgacggccgagaaccatcgcgctctggtcaccagcaacatcgtcaagatg
cgcggcaccaatgtcggacaggataaccgcgagccgttgcataccatcagcgcgcaggga
actcacttcgccgaggttcgctcgttcctgatcaagtattacggcaccgatcaggatcct
caattgcgcgaaccactccacacggtcaccaccaaggaccgctatggcctcgtgaccgtc
cacggtgaggaatatgccatcgtagacatcggcatgcgcatgctggcaccgcgcgagctc
ttccgggcgcagggatttcccgagaaatacatcatcgaccgcggcctgcacatcgacgcg
gatggtaatcatcattggaagccactcacaaagagcgcccaggtgcgcatgtgcggtaac
agcgtctgcccgccgctggcggctgcgctgattcgggctaattgcgcggacatgatcgtc
agcaaagaagtgaaacggaggtcagcatga
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