Silurus meridionalis (southern catfish): 124394757
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Entry
124394757 CDS
T08004
Symbol
gria4a
Name
(RefSeq) glutamate receptor 4a isoform X1
KO
K05200
glutamate receptor 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124394757 (gria4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124394757 (gria4a)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124394757 (gria4a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF2061
Motif
Other DBs
NCBI-GeneID:
124394757
NCBI-ProteinID:
XP_046719147
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Position
12:complement(2853310..2916580)
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AA seq
889 aa
AA seq
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MMRMVEPALLFGLWALAHGAFPSSVQIGGLFIRNTDQEYTAFRLAVFLHNTSPNATEAPF
NLVPHVDNIESANSFAVTNAFCSQYSRGVFAIFGVYDKRSVHTLSSFCASLHISLVSPSF
PADGDTQFLIQLRPSVRGALLSVIDHYEWTRFIFLYDTDRGYTILQAIMEKAGQNGWLVS
AICVENFGDAAYRRLLEDLERRNEKKFVVDLEAERLQNFLEQVVSVGKHVKGYHYIIGNL
GFKDVSLERFMHGGANVTGFQLVDFSKPMVIKLMQRWNKLDQREYPGSETPPKYTSSLTY
DAVLVMAEAFRNLRRQKIDITRRGNAGDCLANPAAPWNQGIDMERTLKQVRIEGLTGNIQ
FDQNGRRVNYTMDVFEMMSNGPQKIGYWNDMDKLVLVQSELAGGNGSAGENRTVIVTTIM
EGPYVMLKKNWELYQGNDQYEGYCVDLASEIADHIGIKYKISIVPDGKYGARDPETKIWN
GMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPL
AYEIWMCIVFAYIGVSVVLFLVSRFSPYEWKRDEADEEPDADQPPNEFGIFNSLWFSLGA
FMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQT
EIAYGTLDSGSTKEFFKRSKIAVYEKMWSYMKSAEPSVFTKTTVEGVSRVRRSKGKYAFL
LESTMNEYTEQRKPCDTMKVGGNLDSKGYGIATPKGSQLRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGDAKDKSSQALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEE
KKRADEWKQKQAESAELNFSPVPSPSPSVQNLATYREGYNVYGSDGIKI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggatggtcgaaccggcgctgctcttcgggctgtgggcgctcgcgcacggggct
tttcccagcagcgtgcagatcggaggcttgttcatcaggaacacggatcaggagtacacc
gcgttccgattggccgtgttcctccacaacacgagcccaaatgccaccgaggctccgttt
aacctcgtcccacacgtggacaacatcgagagtgcaaacagctttgctgtcaccaatgca
ttctgctcgcagtactcgcgaggcgtgttcgcaatattcggcgtgtacgacaagcgatcg
gtccacaccctctcgtcgttctgtgcgtcgctgcacatctcgcttgtctcacccagcttc
ccggcagatggagacacccagttcctgattcagctccggccgtcggtccgcggcgcctta
ctcagtgttatcgaccactacgaatggacccgcttcatcttcctctacgacaccgaccga
ggatacaccattcttcaagccatcatggagaaagctggccaaaatggatggctggtgagc
gcaatctgtgtggagaattttggtgatgctgcttaccgacgcctcctcgaagatctggaa
cgtcgcaacgagaagaagtttgttgttgatctagaagcagaacgactccagaacttttta
gagcaggtggtgagtgtaggaaaacatgtgaagggttatcattacatcattggcaacctg
ggctttaaggacgtgtctctcgagcgctttatgcatggtggagcaaatgtcaccgggttc
cagctggtggatttcagtaagccgatggtgatcaaacttatgcagcgctggaacaaactc
gaccagagagaatacccaggctctgaaaccccacccaagtacacgtcctccctgacctac
gacgctgtgctggtgatggccgaagcgttccggaacctacggcgccagaagattgacatc
acgcgtcgtgggaatgcaggagactgtctggccaatccagcggctccgtggaaccaaggc
attgacatggagcgcaccttgaaacaggtacggatcgaaggtctaacaggaaacattcag
tttgatcagaatggccgcagagtgaactacactatggatgtgtttgaaatgatgagcaat
ggtccacaaaagatcggttactggaatgacatggataaattggtactggtgcaaagtgag
ctagcaggaggaaacggctcagctggggagaacagaacagtcatcgtcaccaccatcatg
gaaggaccatatgtgatgctgaaaaaaaactgggagctgtatcaagggaacgatcagtac
gagggatattgtgtggatctggcgtctgaaatcgctgatcacatcggaattaagtacaaa
atctccattgttccagatgggaagtatggtgcaagggatccagagaccaagatctggaac
gggatggtgggggagctggtgtacgggaaagccgagattgcggtagctcctttaacgatc
accctggtgagggaggaagtgatcgacttctccaaacccttcatgagcctcgggatctcg
attatgatcaaaaagccgcagaagtccaagccgggggtgttctcattcctcgacccattg
gcctacgagatctggatgtgcatcgtgttcgcctacatcggggtgagcgtcgtgctcttc
cttgtcagccgcttcagtccatacgagtggaaaagagacgaggccgacgaagaaccagat
gccgatcaaccacccaatgagtttggcatctttaacagcctgtggttcagccttggagcc
ttcatgcaacagggctgcgacttcacgcccaggtctttgtcaggacgtatagtgggtggg
gtctggtggttctttactctcatcatcatctcgtcgtacacggcgaacctggcagctttc
ctcactgtggagagaatggtatctcccatcgagagcgcagaggatcttgccaagcagacc
gagatcgcctacggcacactcgattccggctccaccaaagagttcttcaagaggtctaag
atcgcagtgtatgagaagatgtggtcgtatatgaagtcagcagaaccttccgtgttcacg
aagacgacggtcgagggcgtgtcccgggtgcgcaggtcgaaggggaagtacgcgttcctg
ctcgagtccaccatgaacgagtacacggagcaaaggaagccgtgcgacaccatgaaggtc
ggagggaaccttgactccaaaggctacggcatcgccacgcccaagggctcgcagctaaga
aacgctgtgaacctggctgtgctaaagctgaatgaacaaggcctgttggacaaattgaaa
aataaatggtggtacgacaaaggcgagtgtggcagcgggggcggagatgctaaggacaag
agttctcaggcacttagcctaagcaacgtagcgggcgtgttctacatcctggtgggcgga
ctcggcctcgccatgctggtggcgctcgtcgagttctgctacaagtcacgggccgaggag
aagaaacgggcggacgagtggaagcagaaacaagccgaatcggctgagctgaacttcagt
ccggtgcccagcccaagcccgagcgtgcagaacttggcgacctacagagaagggtacaac
gtgtacggttcggacggcataaagatctaa
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