Solenopsis invicta (red fire ant): 105202772
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Entry
105202772 CDS
T03916
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105202772
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105202772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105202772
04131 Membrane trafficking [BR:
soc04131
]
105202772
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105202772
Membrane trafficking [BR:
soc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
105202772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
105202772
NCBI-ProteinID:
XP_011169742
LinkDB
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Position
3:16854302..16857660
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AA seq
405 aa
AA seq
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MYEAHSINAEHKDLIHDIAYDYYGERMATCSSDQFVKVWDEDEHGNWHLTASWKAHSGSV
WKVTWAHPEFGQVLATCSFDRTAAVWEEIVGEGSGPEARGSKHWIKRTNLVDSRTSVTDV
KFAPKTLGLLLATCSADGFIRIYEAPDIMNLSQWTLQHDINCKLSCSCLTWNPSLSRLHP
PMIAVGSDDPNPTLGAKIFIYEYSENSRRWMKAETLSSITDAVYDIAFAPNLGRNFHTLA
IATKDVRIVTLKPTDESTQTGVSHFETNVVAQFDDHYCTVWRVSWNCMGTILASSGDDGC
VRLWKDNFINHWKCISVLKGDGIPAQGTETPIVATPPSSSTPAQQMPSTTRTVSIVTVPA
EKPTATIVCSNKWQAPVIKGRFSKSVWLGNPSEPTPPLLPIIAKK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggcacacagcatcaatgctgagcacaaggatctcatacacgacatcgcctac
gattattatggggaacgaatggcgacgtgttccagcgaccaatttgtgaaggtttgggac
gaggatgaacatggaaactggcatttaactgcttcttggaaagctcacagtggatcagta
tggaaggttacttgggcgcatccagaatttggtcaagtccttgctacatgttcgtttgat
cgtaccgctgctgtttgggaggaaattgttggcgaagggtctggaccagaagcacgtggc
agtaagcattggattaaaagaacaaacttggtagattcacgtacttctgtcacagatgta
aaatttgcaccaaagaccttgggccttttactggctacttgtagtgcagatggttttatt
cggatatatgaagctccagatatcatgaatttgagtcaatggacgttacaacatgatatc
aactgcaaactttcgtgtagctgtcttacatggaatccgtctctctcgagattacatcca
cctatgatagcagttggcagtgatgatccgaatcctacgcttggggcaaaaatcttcatc
tatgaatactccgagaacagtagacgttggatgaaggccgagacattgtcaagcattacg
gatgccgtttacgacattgcgtttgctcctaatctgggcagaaatttccatacactagcc
atagctacaaaggacgtacgaatagtcactttgaaaccgacggacgagagtacgcagacc
ggtgtgtcgcatttcgaaacgaatgtagttgcgcagtttgacgatcattactgtactgta
tggcgtgtcagctggaactgtatgggaacgattttagcgagttccggcgatgacggttgc
gtccgattgtggaaggacaattttattaatcactggaaatgcatctctgtcctgaaggga
gatggtattccggcacaaggtaccgaaactcccatcgtcgcgactccgccgagctcgtct
acgccggctcaacagatgccgtcaaccacaaggactgtaagcatagtcacggttccggcg
gagaagccgaccgctaccatcgtatgcagtaacaagtggcaagcgcctgttataaaagga
cgctttagtaaatccgtatggctgggtaatcctagcgaaccaacaccaccgttgttgccg
attatagcaaagaaataa
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