Solanum pennellii: 107002441
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Entry
107002441 CDS
T04130
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
spen
Solanum pennellii
Pathway
spen00906
Carotenoid biosynthesis
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107002441
Enzymes [BR:
spen01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
107002441
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
GDI
GIDA
FAD_oxidored
Pyr_redox_2
Thi4
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
107002441
NCBI-ProteinID:
XP_015055959
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Position
10:complement(79569316..79575217)
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AA seq
615 aa
AA seq
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MCTLSFMFPNSLLDGTCKTVALGDSKPRYNKQRSSCFDPFRIGNCTDQQQLCGLSWGVDK
AKGRRGGTVSNLKAVVDVDKRMQSYGSSDVEGNESGSYDAIVIGSGIGGLVAATQLAVKG
AKVLVLEKYVIPGGSSGFYERDGYKFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIP
DPTTVHFHLPNDLSVRIHREYDDFVEELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKS
LEEPIYLFGQFFKKPLECLTLAYYLPQNAGSIARKYIRDPGLLSFIDAECFIVSTVNALQ
TPMINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLDDHGSQIIYRANVTSIILDNGKAV
GVKLSDGRKFYAKTIVSNATRWDTFGKLLKAENLPKEEEKFQKAYVKAPSFLSIHMGVKA
DVLPPDTDCHHFVLEDDWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWE
GLSPKDYEAKKEVVAERIISRLEKTLFPGLKSSILFKEVGTPKTHRRYLARDSGTYGPMP
RGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSDVL
DSALLRLLGWLRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaccttgagttttatgtttcctaattcacttcttgatggtacctgcaagactgta
gctttgggtgatagcaaaccaagatacaacaaacagagaagttcttgtttcgaccctttc
agaattggaaattgtactgatcagcagcagctttgtggcttgagttggggggtggacaag
gctaagggaagaagagggggtactgtttccaatttgaaagcagttgtagatgtagacaaa
agaatgcagagctatggcagtagtgatgtagaaggaaatgagagtggcagctatgatgcc
attgttataggttcaggaataggtggattggtggcagcgacgcagctggcggttaaggga
gctaaggttttagttctggagaagtatgttattcctggtggaagctctggcttttacgag
agggatggttataagtttgacgttggttcatcagtgatgtttggattcagtgataaggga
aacctcaatttaattactcaagcattggcagcagtaggacgtaaattagaagttatacct
gacccaacaactgtacatttccacctgccaaatgacctttctgttcgtatacaccgagaa
tatgatgacttcgttgaagagcttgtgagtaaatttccgcatgaaaaggaagggattatc
aaattctacagtgaatgctggaagatctttaattctctgaattcattggaactgaagtca
ttggaggaacccatctacctttttggccagttctttaagaagccccttgaatgcttgact
cttgcctactatttgccccagaatgctggtagcatcgctcggaagtatataagagatcct
gggttgctgtcttttatagatgcagagtgctttatcgtgagtacagttaatgcattacaa
acaccaatgatcaatgcaagcatggttctatgtgacagacattttggcggaatcaactac
cccgttggtggagttggcgagatcgccaaatccttagcaaaaggcttggatgatcacgga
agtcagataatttatagggcaaatgttacaagtatcattttggacaatggcaaagctgtg
ggagtgaagctttctgacggaaggaagttttatgctaaaaccatagtatcgaatgctacc
agatgggatacttttggaaagcttttaaaagctgagaatctgccaaaagaagaagaaaaa
ttccagaaagcttatgtaaaagcaccttcttttctttctattcatatgggagttaaagca
gatgtactcccaccagacacagattgtcaccattttgtcctcgaggatgattggacaaat
ttggagaaaccatatggaagtatattcttgagcattccaacagttcttgattcctcattg
gccccagaaggacaccatattcttcacatttttacaacatcgagcatcgaagattgggag
ggactctctccgaaagactatgaagcgaagaaagaggttgttgctgaaaggattataagc
agacttgaaaaaacactcttcccagggcttaagtcatctattctctttaaggaggtggga
acaccaaagacccacagacgataccttgctcgtgatagtggtacctatggaccaatgcca
cgcggaacacctaagggactcctgggaatgcctttcaataccactgctatagatggtcta
tattgtgttggcgatagttgcttcccaggacaaggtgttatagctgtagccttttcagga
gtaatgtgcgctcatcgtgttgcagctgacttagggtttgagaaaaaatcagatgtgctg
gacagtgctcttcttagactacttggttggttaaggacactagcatga
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