Strongylocentrotus purpuratus (purple sea urchin): 586013
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Entry
586013 CDS
T01019
Name
(RefSeq) squalene synthase isoform X3
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu00100
Steroid biosynthesis
spu01100
Metabolic pathways
Module
spu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
586013
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spu01006
]
586013
Enzymes [BR:
spu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
586013
Prenyltransferases [BR:
spu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
586013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
586013
NCBI-ProteinID:
XP_011665372
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MEFLKSIGHPDEVMALLKFKLGGGQHIIPKQKLDEMSPTARKCYVYLNQTSRSFAAVIQA
LDGDLRHAVCIFYLVLRALDTVEDDMTIPLKDKVQMLQNFYKNLESPDWKYMDSKDKDRI
VLEDFPTISTEYRGLDEHYREVISDICHKMGDGMSEVLQTEVITLQDWNMYCHYVAGLVG
IGLSKLFSASKLEDPIVGKDTQLSNSMGLFLQKTNIIRDYLEDNIDKREFWPRDVWSKYG
KKLSDFQEKENITPALHCLNELITNALEHVPDVIKYMSRLRNQTVFNFCAIPQVMAIATL
AKCYNNRNVFSGVVKIRKGQAVGLMMEATCFQSLRRILYKYAREIGKTIPPGDPSAPKTQ
KIISTVTSLGEDTMITGYNLFPPLYVSMAIMLALIIYNYWSTLVLLGDQLD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttgaagtcaataggtcatccagacgaggtcatggctcttctaaagttcaag
cttggaggaggtcagcacatcattcccaaacaaaaactggacgagatgtcaccgactgct
aggaaatgttacgtgtatctgaaccagacgagtaggagctttgcagcagtcattcaggca
ttggatggagacctgagacatgcagtgtgtatattctacttggttctgagagcactggac
actgtagaagatgacatgaccattcccctgaaagacaaagttcaaatgctgcagaatttc
tacaaaaaccttgagagtcctgactggaagtacatggatagcaaagacaaggacaggatt
gttctagaagattttccaacaatctctacagagtacaggggtttagatgagcattaccgg
gaagtgatctcagatatttgtcataaaatgggagatggaatgagtgaggtcttacaaaca
gaagtcatcacattacaggactggaatatgtactgccattatgtagccggtctggtgggc
atcggtctctctaaactcttcagtgcctccaagctggaggatcctatcgtcggcaaggat
acgcaactctcaaattccatggggctgttcttgcagaagaccaacatcatccgtgactac
ctggaggataacatcgataagagggagttctggccaagagatgtatggagcaagtacggc
aagaaactgagtgacttccaagagaaggaaaacatcaccccagcattgcactgcctcaac
gaactcatcacaaatgccctcgaacatgtacccgatgtcatcaaatacatgtctcgcctt
cgcaaccaaactgtcttcaacttttgtgcaattcctcaggtaatggctatcgcaacactg
gctaagtgttataacaaccgtaatgtattctctggagtggtcaagattcgcaagggtcaa
gcagttggcctcatgatggaagctacatgtttccagagtctgagacgtatcctgtataaa
tatgctcgggagattggaaaaaccattccccctggcgatccttctgctcctaagacccag
aagatcatcagcaccgtcacgtcgctgggagaggacaccatgatcacggggtacaacctc
ttcccacctctctatgtctccatggcgatcatgcttgccctcatcatctataactactgg
agtacgttggttctccttggggatcagttagactga
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