Sus scrofa (pig): 100521092
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Entry
100521092 CDS
T01009
Symbol
WDR59
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 59
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100521092 (WDR59)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100521092 (WDR59)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100521092 (WDR59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-RING_16
zinc_ribbon_16
RWD
zf-RING_2
MIOS_WD40
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100521092
NCBI-ProteinID:
XP_020949444
LinkDB
All DBs
Position
6:12682166..12769339
Genome browser
AA seq
993 aa
AA seq
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MAARWSSENVVVEFRDSQATAMSVDCLGQHAVLSGRRFLYIVNLDAPFEGHRKISRQSKW
DIGAVQWNPHDSFSHYFAASSNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDL
LVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVKWNKKNANCLATSHDGDVRIWDKRKP
STAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWDYRQPRKYLSILPCQVPVWKA
RYTPFSNGLVTVMVPQLRRENSLLLWNVFDLNTPVHTFVGHDDVVLEFQWRKQKEGSKDY
QLVTWSRDQTLRMWRVDSQMQRLCAHDLLDGVDEFIEGISLLPEPEKTLHTQDAEHQHNS
SHGEEEVLKEDPPSSLLEEKKSDPLGLPPTLQQEFSLINVQIRNVNVEMDAADRSCTVSV
HCSNHRVKMLVKFPAQYPNHAAPSFQFINPTTITSTMKAKLLKILKDTSLQKVKRNQSCL
EPCLRQLVSCLESFVNQEDSASSNPFALPNSVTPPLPTFARVTTAYGSYQDANIPFPRTS
GARFCGAGYLVYFTRPMTMHRAVSPTEPTPRSLSALSAYHTGLIAPMKIRTEAPGNLRLY
SGSPTRSEKEQLSVSSFYYKERMSPRSARRRWSIQAINDFPKSRRWKSKREGSDAGNRPI
KAAGKVIIQDIACLLPVHKSLGELYILNVNDIQETCQKNATSALLVGRKDLVQVWSLATV
ATDLCLGPKSDPDLETPWARHPFGRQLLESLLAHYCRLRDVQTLAMLCSVFEAQSRPQGV
PNPFGPFPSRSSNLVVSHSRYPSFTSSGSCSSMSDPGFNTSGWNIAGRETEHMSSPWGES
SPEEIRFGSLTYSDPRERERDQHDKNKRLLDPANTQQFDDFKKCYGEILYRWGLREKRAE
VLKFVSCPPDPHKGIEFGVYCSHCRSEVXGTQCAICKGFTFQCAICHVAVRGSSNFCLTC
GHGGHTSHMMEWFRTQEVCPTGCGCHCLLESTF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagatggagcagcgagaacgtggtggtggaattccgcgactcccaggcaact
gcaatgtctgtggactgtctggggcagcatgcggtgctttccggccgccgattcctttac
atcgtcaatctggatgccccttttgaaggtcaccgaaagatctcacgccagagcaagtgg
gacatcggagccgtgcagtggaatcctcatgacagcttctcgcactattttgcagcctcg
agcaaccaacgggtcgacctttataagtggaaagatggcagtggggaagttggcacgacc
ttacaaggccacactcgcgtcatcagcgacttggactgggcggtgtttgagccagacctc
ctggtcaccagctctgtggacacctacatctacatttgggatatcaaagacaccaggaag
cccacggtggcgctctctgctgtagcgggtgcctcacaggtcaaatggaataaaaaaaac
gctaattgccttgccaccagtcacgacggggacgttcggatatgggacaagcggaaaccc
agcacggcagtggaatatctcgcagcccacctctccaaaatccatggcctggactggcac
ccagacagcgagcacattctcgccacctccagtcaggacaactcggtcaagttctgggat
taccgccagcctcggaaatacctcagcattctcccttgccaggtgcctgtctggaaggcc
agatacactcctttcagcaatggattggtgacggtgatggtcccccagctgcggagggag
aacagcctgctcttgtggaatgtctttgacctgaacactccggtccatacctttgtgggc
cacgatgacgtggtgctggagttccagtggaggaagcagaaggaagggtccaaggactac
cagctggttacgtggtctcgggatcagaccttgagaatgtggagggtggattcccagatg
cagcggctgtgcgcacatgacctcttggatggtgtcgatgagttcattgagggcatttct
ctgctgccagaaccggagaagacccttcacactcaggacgcggagcaccagcacaactca
agccacggggaagaagaagtcttaaaggaagaccccccgagcagtctcctggaagagaag
aaatcagacccgctgggcctgcctccgactctgcagcaggagttctccctgatcaacgtg
cagatccgcaacgtcaacgtggagatggatgcagcagacaggagctgcacggtgtccgtg
cactgcagcaaccatcgcgtcaagatgctggtgaagttcccggcgcagtacccgaaccac
gcggccccttccttccagttcattaaccccaccaccatcacgtccacgatgaaagcaaag
ctgctgaagatcctgaaagacacttccctgcaaaaagtgaaacgcaaccagagctgtctg
gagccctgcctgcgccagctcgtctcctgcctcgagtcttttgtgaaccaagaagacagt
gcttccagcaacccctttgcgctcccgaactccgtcacgccgcccctaccaacgttcgcc
cgggtcaccaccgcttacgggtcctaccaggatgccaatattccttttccccggacctcg
ggggccaggttctgtggggcagggtacctggtgtatttcacgaggcccatgacgatgcat
cgagcagtgtctccaacagagcccactccaagatctctctcggccttgtctgcctatcac
actggcttgattgcgcccatgaagatccgcaccgaggcccccgggaacctgcgtttgtac
agcgggagccccacacgcagcgagaaggagcagctctcggtcagctccttctactacaag
gagcggatgtctcctcgctctgcccggcgacgttggtccatacaagcaattaacgacttc
ccgaaatcgaggagatggaaaagtaagcgggagggctcggacgctggcaatcgacccatc
aaggctgctgggaaagtgatcattcaggatatcgcctgccttcttcctgttcacaagtcc
ctgggagaactgtacatattgaatgtgaatgatattcaagaaacgtgtcagaagaacgcc
acttctgccttgcttgtcggaaggaaggatcttgtccaggtttggtcactggctacagta
gctacggatctttgccttggtccgaagtctgacccagatttggaaacaccctgggctcga
catccatttgggcgacagctgctggagtccctgttggctcattactgccggctccgggac
gtgcagacactggccatgctgtgcagcgtgtttgaagcccagtcccggccgcagggggtg
ccaaacccctttgggccttttcccagccgctcctctaaccttgtggtgtctcacagccga
taccccagctttacttcctctggttcctgctcaagcatgtccgacccagggttcaacacc
agcggctggaacatagcgggcagagagacagaacacatgtcttccccttggggagagtct
tcaccagaagaaatccgctttgggagtctgacctacagcgatcctcgggagcgcgaacgt
gaccagcacgataaaaataaaaggcttctggacccggctaacacccagcagtttgatgac
tttaagaagtgctatggagaaatcctctaccgctggggtctgagagagaaacgagctgaa
gtgctgaagtttgtctcctgccctcctgatcctcacaaagggatcgagttcggcgtgtac
tgcagccactgccggagtgaggtcncgggcacgcagtgtgccatctgcaaaggcttcacc
ttccagtgcgccatctgccacgtggccgtgcggggctcgtccaatttctgcctgacctgc
gggcatgggggacacaccagccacatgatggaatggtttcggacccaggaggtgtgtccc
accgggtgtgggtgccactgcctgcttgaaagcactttctga
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