Shewanella violacea: SVI_0812
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Entry
SVI_0812 CDS
T01206
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
svo
Shewanella violacea
Pathway
svo00071
Fatty acid degradation
svo00310
Lysine degradation
svo00362
Benzoate degradation
svo00380
Tryptophan metabolism
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
SVI_0812 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
SVI_0812 (gcdH)
00380 Tryptophan metabolism
SVI_0812 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SVI_0812 (gcdH)
Enzymes [BR:
svo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
SVI_0812 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
BAJ00783
UniProt:
D4ZGI4
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All DBs
Position
946416..947591
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AA seq
391 aa
AA seq
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MARVHFDWTDPLQFNALLSEEERMIRDSVHDYAQDKLMPRVLMANRNEHFDREIMNELGE
LGLLGATLPEKYACSNINYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPIYAYGTEAQR
LKYLPKLAKGEWIGCFGLTEPDVGSDPGGMRTRAERIDGGYRLNGAKMWITNSPIADVFI
VWGKLEGKIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDNVEVPESALLPNVEGLK
GPFGCLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLAANQLIQKKLADMQTEIT
LGLFTCLQAGRLMDQDALPVEAISLIKRNSCGKALDIARMARDMHGGNGISDEFHVIRHV
MNLEAVNTYEGTHDIHALILGRAQTGIQAFG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtgcatttcgattggaccgatcccctgcagtttaacgccttactctcggaa
gaggagcgcatgatccgcgacagtgttcacgattatgctcaagacaaactcatgcccagg
gtattgatggccaacagaaatgagcatttcgatcgggagatcatgaatgagttaggtgag
ctgggtttgctgggagccaccttgcctgaaaaatatgcctgttccaatatcaattatgtt
agctatggcctagtggctcgtgagatagagcgagtcgacagtggttatcgttctgccatg
agtgtgcagtcctcattagtcatgcatcctatctatgcctacggtactgaagcgcagagg
ctaaagtatttacctaaactagcaaagggtgaatggattggttgttttggtttgactgag
ccagatgttggatccgatcccggtggcatgaggacccgcgccgaacgtatcgatggcggc
tatcgcctcaatggtgccaagatgtggatcacgaattcacccattgccgatgtgtttatt
gtctggggtaagctggaaggaaaaattcgaggcttcatcttggaaaaaggcatgaagggt
ttgagcgcgcctaaaatagagggcaaattttcccttagagcctccatcacaggcgaaata
gtcatggataatgtcgaagtgcctgagtctgcgttattgcctaatgttgagggcttgaag
ggcccctttggttgcttgaacaaggcgcgctacggcatagcttggggagcgctgggtgcc
gctgagttctgttggcatgcagcccgtcaatataccttagataggattcagtttaatcgc
cccttggcggccaatcagttaattcagaagaaactggcggatatgcagactgagatcacc
ttaggcttatttacctgcttacaggcggggcgtttgatggatcaagatgccctaccggta
gaagctatctctctgataaagcgcaactcctgtggcaaggcgctggatatcgcccgtatg
gctcgagatatgcacggtggtaatggtatatcagatgagtttcatgtcattcgccacgtc
atgaatctggaggcggtgaatacctacgagggcactcacgacatacatgcacttatctta
ggtcgagctcagacaggtattcaggcatttggataa
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