Thiobacillus denitrificans: Tbd_1810
Help
Entry
Tbd_1810 CDS
T00275
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd00270
Cysteine and methionine metabolism
tbd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Tbd_1810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbd03000
]
Tbd_1810
03032 DNA replication proteins [BR:
tbd03032
]
Tbd_1810
03036 Chromosome and associated proteins [BR:
tbd03036
]
Tbd_1810
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tbd02048
]
Tbd_1810
Enzymes [BR:
tbd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Tbd_1810
Transcription factors [BR:
tbd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Tbd_1810
DNA replication proteins [BR:
tbd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Tbd_1810
Chromosome and associated proteins [BR:
tbd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tbd_1810
Prokaryotic defense system [BR:
tbd02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Tbd_1810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AAZ97763
UniProt:
Q3SHX0
LinkDB
All DBs
Position
1912766..1913914
Genome browser
AA seq
382 aa
AA seq
DB search
MPSFYEFFAGGGMARAGLGAEWDCLFANDFDPKKAASYAVNWDGDELRVGDVGTLTVPDL
PGRADLAWASFPCQDLSLAGAGAGLKGERSGTFWPFWKLVKALGDEDRAPRLVVLENVYG
ALSSHGGKDFAAICAALAGAGYRFGAVIVNAVHFLPQSRPRLFIIGALKSMPVPLGLVAG
GPAGEWHPAALVEAYGKLSRRSQGAWVWWDLPAPPIRASIFADLVEDDPQGVTWHTPAET
KKLLALMNPHNLAKVEAAKKAGRRMVGTIYKRTRADGPNGEKAQRAEIRFDDIAGCLRTP
VGGSSRQTIMVIEGKRVRSRLLSPREAARLMGLPDTYMLPKNYNEAYHLAGDGVAVPVVR
FLADSVLEPLLAAALATEKKAA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcttttacgaattcttcgccggcggcggcatggcccgcgccggcttgggtgcc
gaatgggattgcctattcgccaacgatttcgatccgaagaaggcggcgagctacgccgtc
aattgggacggcgatgagttacgcgtcggcgacgtggggacgctcacagtccccgatctg
ccaggccgcgctgatctcgcttgggcgtcatttccatgccaggacctttccctagccggc
gcgggcgccggcctcaagggggagcgctcgggcacgttctggccgttctggaagctggtg
aaggcgctaggcgatgaagaccgcgccccacgcctggtcgtcctcgaaaacgtctacggt
gccctcagttcgcacggcggaaaggactttgcggcgatctgcgccgcgctcgcgggcgcg
ggctaccgtttcggcgcggtgatcgtgaacgcggtccacttcctcccgcagtcgcgtccc
cgactgtttatcatcggcgcgctcaagtcgatgcccgtgcctctgggactcgtcgccggc
ggcccagccggcgaatggcatccggcggcgctggtagaagcctatggcaagctctccaga
cgatcacaaggcgcgtgggtgtggtgggaccttcccgcgccgccgatccgcgcctcgatc
ttcgccgatttagtggaagacgatccccagggcgtcacttggcacacgccggcggaaacc
aagaagctacttgccttgatgaatccccataacctggcgaaggtcgaagctgcgaagaaa
gccggccgccgcatggtcggcacgatctacaagcgcacgcgcgccgacggtcccaatggc
gagaaagctcagcgggcagaaattcgctttgatgatatcgccggctgcctgcgcacgccc
gtaggcggctccagtcggcaaaccatcatggtcatcgaaggcaagcgcgtccgctcgcgc
ttgctgtcgccgcgcgaagccgctcgcctcatgggcctgccggatacctacatgttgccg
aagaactacaacgaggcctatcacctcgccggcgacggcgtggccgtgccggtggtgcgc
ttcttggccgacagcgtcctagagccgctgctggccgccgcccttgcgaccgagaagaag
gcggcgtag
DBGET
integrated database retrieval system
