Tripterygium wilfordii (thunder duke vine): 120002694
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Entry
120002694 CDS
T07256
Name
(RefSeq) squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00100
Steroid biosynthesis
twl00909
Sesquiterpenoid and triterpenoid biosynthesis
twl01100
Metabolic pathways
twl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120002694
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
120002694
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
twl01006
]
120002694
Enzymes [BR:
twl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120002694
Prenyltransferases [BR:
twl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120002694
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
GAS
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
120002694
NCBI-ProteinID:
XP_038707394
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All DBs
Position
7:complement(6582615..6588474)
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AA seq
413 aa
AA seq
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MGSLGTMLKHPDDVYALLKLKMAAKQAEKQIPPQPHWAFCYTMLLKVSRSFALVIQQLGP
QLRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILKAFHQHIYEQDWHFSCGTKEYKVLMD
QFHHVSTAFLELGKGYQEAIEEITQRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNALIHVEDCLKYMSALREPGIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDQTRTMSDVYGAFFDFSSMLTSKVDKNDPNAVKTLSRL
EAIQKTCRDSGVLNKRKTYVLDNGSKYAPLLLVILFIVFGIFIANMSPGWPNK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttagggacgatgttgaagcatccagatgatgtgtatgctctattgaagctg
aagatggcggcgaagcaagcggagaagcagatcccgccgcagcctcactgggccttctgc
tacactatgctccttaaagtctctcggagcttcgctctcgtcattcaacagctcggtccc
cagctccgcgacgctgtgtgcatattttatttggttcttcgagccctcgatactgttgag
gatgacactagcatacctacagatgtgaaagtgcctatcctcaaagcttttcatcagcac
atatatgagcaagattggcacttttcatgtggcacaaaagagtacaaggtgctcatggac
cagtttcatcatgtttcaactgcttttctggagcttggaaaaggttatcaggaggccatt
gaagaaataacacagcgaatgggcgcaggaatggcaaaatttatatgcaaggaggtggaa
tccatcgatgactatgatgaatattgccactatgtagcaggactcgtagggctaggtctt
tccaagctttttcatgcctctggatctgaagatttggcttcagattctctctcgaattcc
atgggattatttcttcagaaaacaaacatcattcgtgattatttggaggatataaacgag
atacctaagtcccgcatgttttggcctcgcgagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggagaattcagtcaaggcagtgcaatgcttgaatgacatggta
actaatgccttgatccatgttgaggattgcttaaagtacatgtccgcgctgcgagaacca
ggcatatttcgattttgcgccatccctcagattatggcaattggaacgctggcactgtgc
tacaacaacattgaagtcttcagaggcgtagtgaagatgaggcgtggtctcactgcaaaa
gtcattgaccaaacaaggacaatgtctgatgtgtatggtgctttctttgacttttcctca
atgctgacgtccaaggttgacaagaatgatcctaatgcagtaaaaacactgagcaggctg
gaagcaatacagaaaacttgcagggactcgggtgtcctaaataagaggaaaacttacgta
cttgataacgggtcaaaatatgcccctcttttgttggtcatcctttttattgtatttggc
atctttatcgccaatatgtcccctggctggccaaataagtag
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