Vibrio cholerae O1 MJ-1236: VCD_001049
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Entry
VCD_001049 CDS
T00903
Name
(GenBank) S-ribosylhomocysteine lyase/autoinducer-2 production protein LuxS
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00270
Cysteine and methionine metabolism
vcj01100
Metabolic pathways
vcj01230
Biosynthesis of amino acids
vcj02024
Quorum sensing
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VCD_001049
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCD_001049
05111 Biofilm formation - Vibrio cholerae
VCD_001049
Enzymes [BR:
vcj01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
VCD_001049
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Gene cluster
GFIT
Motif
Pfam:
LuxS
DUF6916
Motif
Other DBs
NCBI-ProteinID:
ACQ59232
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Position
1:complement(28113..28631)
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AA seq
172 aa
AA seq
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MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLY
AGFMRNHLNGSQVEIIDISPMGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQI
PELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELALPESMLNELKVH
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgccattattagacagttttaccgtcgatcatactcgtatgaatgcaccggcggtgcgt
gttgccaaaaccatgcaaaccccaaaaggggatacgattaccgtatttgatttgcgtttt
actatgccaaacaaagatatcttgtctgagcgcggtatccatactctagagcatctctac
gcgggctttatgcgcaatcaccttaacggcagccaagtggagatcatcgatatttcacca
atgggttgccgtacaggtttctacatgagcttgattggtgcgccgacagaacagcaagtg
gcacaagcatggctagccgcaatgcaagatgtgttgaaagttgaaagccaagagcaaatt
cctgagctgaatgagtaccagtgcggcactgcggcgatgcactcgctcgaagaagccaaa
gcgattgcgaaaaacgtgattgcggcaggcatctcggttaaccgtaacgatgagttggcg
ctgcccgaatctatgctcaatgagctgaaggttcactaa
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