Volvox carteri f. nagariensis: VOLCADRAFT_79344
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Entry
VOLCADRAFT_79344 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00100
Steroid biosynthesis
vcn00909
Sesquiterpenoid and triterpenoid biosynthesis
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
VOLCADRAFT_79344
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
VOLCADRAFT_79344
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vcn01006
]
VOLCADRAFT_79344
Enzymes [BR:
vcn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
VOLCADRAFT_79344
Prenyltransferases [BR:
vcn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
VOLCADRAFT_79344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
9624653
NCBI-ProteinID:
XP_002946755
JGI:
79344
UniProt:
D8TK09
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MGKLGEVLSHPDEFLPLVRMARAAQKATRLPKDPDLAFCYGILNDVSRSFAIVIQQLPNP
LRDAICVFYLVLRGLDTVEDDMALEVSFKVPQLRSFHERIYDRGFTMACGYKHYKRLMAQ
FGTVVNVFLSLEPAHQKVIADITRRMGHGMADFIEKEVEAVKDYDLYCHYVAGLVGIGLS
QLFAASGLESPSIGSEEDLANHMGLFLQKTNIIRDYLEDIMEEPAPRMFWPREIWGRYGP
SLEHFKDPVNRKQAVQCLNHMVTDALRHLPYCLQYMKQLKHVLVFRFCAIPQIMAAGTLA
LCYNNGKVFEGEMVCVVKMRRGQTAKVFETCNDMGDLYRWFIRFLEMLKTKVSVSPRCGY
LAAVALPAPFPLPSGGGWEGARPWAPGGPGGGEVDWGPMHLSVSVCLGGRCGCGWGSIAV
WMVGFRLRISMEVWRYGRRRDGGAVYE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcttggtgaggttctttcgcatccagatgaatttttacctctggtgcggatg
gcgcgcgccgcgcaaaaggcaaccagacttcccaaggatccggacttggcgttctgctac
ggcatcttgaacgatgtgtcgcggagctttgccatcgtcattcaacaacttcctaatccg
cttcgtgacgccatttgtgtgttctacctggtgctgcgcgggttagacaccgtcgaggac
gacatggcgctcgaagtcagctttaaagtgccgcaactcaggtccttccacgagcgtatt
tatgaccggggcttcacgatggcctgcggctacaagcactacaagcggctcatggcgcaa
ttcggcaccgtggtcaacgtgttcctcagcctggagcccgcgcaccaaaaagtcatcgcg
gacatcactcgccgcatgggccacggcatggcagacttcatcgaaaaggaggttgaggcc
gtgaaggactacgacctgtactgccattacgtggcggggctagtgggcattgggctgtcg
caactttttgccgccagcggtctggagtccccctccatcggcagcgaggaggacctggcc
aaccacatggggttgttccttcagaagaccaacatcatcagagactacctggaggatatc
atggaggagcccgccccccgcatgttctggccccgggagatctggggtcgctacggcccc
tccctggagcacttcaaggaccccgtcaaccgcaaacaagccgtacaatgcctcaaccac
atggtcacggacgcgttgcggcacctgccgtactgtctgcagtacatgaagcagctgaag
cacgtgctggtgttccggttctgcgccattccccaaatcatggcggcagggaccctggcg
ctgtgttacaacaacggcaaggttttcgagggtgagatggtgtgtgttgtcaagatgcgc
cgcggccagacggccaaggtattcgagacgtgtaacgatatgggcgacttgtaccgctgg
ttcatccgcttcctggagatgctcaagaccaaggtgagtgtgtctcctcgatgtggctac
ttggcggcggtagctttgcctgccccctttcctctcccttccgggggtgggtgggaggga
gccaggccttgggcgccagggggccccggggggggggaagtggactggggccccatgcat
ctgtcggtgtccgtgtgcctgggtggccggtgcgggtgcgggtgggggtctatcgcggtg
tggatggttggctttcgtttgcggatttccatggaggtatggagatatggacggcggagg
gatggaggagcggtttatgagtag
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